RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 MIDNQ504T8 468 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 TMEM255AQ5JRV8 349 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 KLF17Q5JT82 389 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF362Q5T0B9 420 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF774Q6NX45 483 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 SLC27A4Q6P1M0 643 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 LEG1Q6P5S2 330 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 C16orf87Q6PH81 154 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 SLC25A47Q6Q0C1 308 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 LRRN1Q6UXK5 716 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 LCNL1Q6ZST4 164 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 C9orf139Q6ZV77 190 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 NKAIN4Q8IVV8 208 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 SLC15A3Q8IY34 581 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 PARP8Q8N3A8 854 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 DPP10Q8N608 796 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 OR10A6Q8NH74 314 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 MOSPD2Q8NHP6 518 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 TMEM255BQ8WV15 326 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 ITLN1Q8WWA0 313 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 DYDC1Q8WWB3 177 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 TMIGD2Q96BF3 282 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 TLCD1Q96CP7 247 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 PLEKHA8Q96JA3 519 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF48Q96MX3 618 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-207ENST00000483407 SH3GL1Q99961 368 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 C1QTNF5Q9BXJ0 243 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 WNT5BQ9H1J7 359 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 TMBIM4Q9HC24 238 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 C20orf141Q9NUB4 165 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 DCAF16Q9NXF7 216 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 KIF17Q9P2E2 1029 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 IL19Q9UHD0 177 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 RIMS3Q9UJD0 308 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 SH3GLB1Q9Y371 365 aa4.92□□□□□ -1.62
CSDE1-207ENST00000483407 TRAV40A0A0B4J280 105 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 A0A0G2JK05 382 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 LRRC30A6NM36 301 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 F5H0A9 414 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-207ENST00000483407 TMEM178BH3BS89 294 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 XKRYO14609 159 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 SGCEO43556 437 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 DOK2O60496 412 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 ACTL6BO94805 426 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 WNT2P09544 360 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 TSPAN19P0C672 248 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 IGHV4-38-2P0DP08 117 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 IFI30P13284 250 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 RPS2P15880 293 aaKnown RBP4.91□□□□□ -1.62
CSDE1-207ENST00000483407 KITLGP21583 273 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 MDKP21741 143 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-207ENST00000483407 HTR5AP47898 357 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 BPIFB3P59826 476 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 SEC61A1P61619 476 aaKnown RBP4.91□□□□□ -1.62
CSDE1-207ENST00000483407 GNB2P62879 340 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 PAX8Q06710 450 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 ST3GAL3Q11203 375 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 FHL3Q13643 280 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 CYLC2Q14093 348 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-207ENST00000483407 SELPLGQ14242 412 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 ANKDD1AQ495B1 522 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 SPRNQ5BIV9 151 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 RABL3Q5HYI8 236 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 ERICH5Q6P6B1 374 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 C17orf107Q6ZR85 190 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 FOXL2NBQ6ZUU3 175 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 CCDC80Q76M96 950 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 C1orf87Q8N0U7 546 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 OR8B3Q8NGG8 313 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 OR4F5Q8NH21 305 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 ABHD5Q8WTS1 349 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 RAB40AQ8WXH6 277 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 PTP4A1Q93096 173 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 UPRTQ96BW1 309 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 HAVCR1Q96D42 359 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 CMBLQ96DG6 245 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 BPIFA2Q96DR5 249 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 C1orf147Q96MC9 270 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-207ENST00000483407 OR2V2Q96R30 315 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 OR8B2Q96RD0 313 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 SIGLEC11Q96RL6 698 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 ECSITQ9BQ95 431 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 NDEL1Q9GZM8 345 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 ZCCHC4Q9H5U6 513 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 BEX1Q9HBH7 125 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 POLE4Q9NR33 117 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 MIOXQ9UGB7 285 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 MMP24Q9Y5R2 645 aa4.91□□□□□ -1.62
CSDE1-207ENST00000483407 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
CSDE1-207ENST00000483407 IGHV3OR16-10A0A075B7F0 116 aa4.9□□□□□ -1.63
CSDE1-207ENST00000483407 IGHV2-70DA0A0C4DH43 119 aa4.9□□□□□ -1.63
CSDE1-207ENST00000483407 SHOX2O60902 331 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-207ENST00000483407 IRF2P14316 349 aa4.9□□□□□ -1.63
CSDE1-207ENST00000483407 TNFRSF1BP20333 461 aa4.9□□□□□ -1.63
CSDE1-207ENST00000483407 CD80P33681 288 aa4.9□□□□□ -1.63
CSDE1-207ENST00000483407 RPL4P36578 427 aaKnown RBP4.9□□□□□ -1.63
CSDE1-207ENST00000483407 OR1E2P47887 323 aa4.9□□□□□ -1.63
CSDE1-207ENST00000483407 SRP9P49458 86 aaKnown RBP4.9□□□□□ -1.63
CSDE1-207ENST00000483407 RGS6P49758 472 aa4.9□□□□□ -1.63
CSDE1-207ENST00000483407 CRYBA2P53672 197 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms