RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OR13G1Q8NGZ3 307 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 REPIN1Q9BWE0 567 aaKnown RBP17.8■□□□□ 0.44
SEC13-217ENST00000482647 OPA3Q9H6K4 179 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 IQCF6A8MYZ5 107 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 LYNX1G3V0Z9 82 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 TBX1O43435 398 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 XRCC2O43543 280 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 NCR1O76036 304 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 LYNX1P0DP58 116 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 COL8A2P25067 703 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 GIFP27352 417 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 ZNF92Q03936 586 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 GLYATL3Q5SZD4 288 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 FAM57BQ71RH2 274 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 PRSS45Q7RTY3 260 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 BIVMQ86UB2 503 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 ZNF679Q8IYX0 411 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 OR2Z1Q8NG97 314 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 SPRYD4Q8WW59 207 aaPredicted RBP17.79■□□□□ 0.44
SEC13-217ENST00000482647 OR8B4Q96RC9 309 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 APOL4Q9BPW4 351 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 OR10A2Q9H208 303 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 CHODLQ9H9P2 273 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 SAP30LQ9HAJ7 183 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 BRD7Q9NPI1 651 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 COPS3Q9UNS2 423 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 LRP12Q9Y561 859 aa17.79■□□□□ 0.44
SEC13-217ENST00000482647 C5orf63A6NC05 138 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 ZNF670-ZNF695F2Z2N8 137 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 CASQ2O14958 399 aaPredicted RBP17.78■□□□□ 0.44
SEC13-217ENST00000482647 CD55P08174 381 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 OR2T7P0C7T2 308 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 ACHEP22303 614 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 CRYBB2P43320 205 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 NR4A2P43354 598 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 CXCR4P61073 352 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 TIGD6Q17RP2 521 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 ZNF322Q6U7Q0 402 aaPredicted RBP17.78■□□□□ 0.44
SEC13-217ENST00000482647 Q6ZR03 302 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 BHLHE23Q8NDY6 225 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 OR2T27Q8NH04 317 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 OR2AE1Q8NHA4 323 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 SPSB4Q96A44 273 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 SGK3Q96BR1 496 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 ELMOD3Q96FG2 381 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 PGAM5Q96HS1 289 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 Q96MT0 163 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 TMEM100Q9NV29 134 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 IKZF2Q9UKS7 526 aa17.78■□□□□ 0.44
SEC13-217ENST00000482647 IGHV1-69-2A0A0G2JMI3 117 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 GGT3PA6NGU5 568 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 CD300LBA8K4G0 201 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 VWC2LB2RUY7 222 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 DLGAP1O14490 977 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 CDC14BO60729 498 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 USF1P22415 310 aaPredicted RBP17.77■□□□□ 0.44
SEC13-217ENST00000482647 CFL1P23528 166 aaKnown RBP17.77■□□□□ 0.44
SEC13-217ENST00000482647 DCTDP32321 178 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 MTNR1AP48039 350 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 TMEM33P57088 247 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 PSMA6P60900 246 aaKnown RBP17.77■□□□□ 0.44
SEC13-217ENST00000482647 TNFAIP6P98066 277 aaPredicted RBP17.77■□□□□ 0.44
SEC13-217ENST00000482647 SLC34A1Q06495 639 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 EGR3Q06889 387 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 RIN1Q13671 783 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 OGFRL1Q5TC84 451 aaPredicted RBP17.77■□□□□ 0.44
SEC13-217ENST00000482647 ENTHD1Q8IYW4 607 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 RHOXF1Q8NHV9 184 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 SLC30A2Q9BRI3 323 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 RGCCQ9H4X1 137 aa17.77■□□□□ 0.44
SEC13-217ENST00000482647 TMEM269A0A1B0GVZ9 245 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 ACOD1A6NK06 481 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 PSMD9O00233 223 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 GABRB1P18505 474 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 ANOS1P23352 680 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 RIDAP52758 137 aaKnown RBP17.76■□□□□ 0.43
SEC13-217ENST00000482647 PRSS12P56730 875 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 LOXL1Q08397 574 aaPredicted RBP17.76■□□□□ 0.43
SEC13-217ENST00000482647 TTC23Q5W5X9 447 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 MAPK1IP1LQ8NDC0 245 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 OR10H4Q8NGA5 316 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 YIPF5Q969M3 257 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 RNFT2Q96EX2 444 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 REEP6Q96HR9 211 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 BPESC1Q9GZL8 116 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 VCXQ9H320 206 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 IL19Q9UHD0 177 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 MTORP42345 2549 aa17.76■□□□□ 0.43
SEC13-217ENST00000482647 MED13LQ71F56 2210 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 ZANQ9Y493 2812 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 PRR32B1ATL7 298 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 LILRA1O75019 489 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 APOL3O95236 402 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 TNFRSF1AP19438 455 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 DDOSTP39656 456 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 HFEQ30201 348 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 ZNF829Q3KNS6 432 aaPredicted RBP17.75■□□□□ 0.43
SEC13-217ENST00000482647 RFLNBQ8N5W9 214 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 CYGBQ8WWM9 190 aa17.75■□□□□ 0.43
SEC13-217ENST00000482647 TBX5Q99593 518 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms