RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GNALP38405 381 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 LUMP51884 338 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 CAPZA1P52907 286 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 TLE3Q04726 772 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 TAF13Q15543 124 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 PHF19Q5T6S3 580 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 C11orf87Q6NUJ2 197 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 CHST4Q8NCG5 386 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 ADAD2Q8NCV1 583 aaKnown RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 PXT1Q8NFP0 134 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 MFSD8Q8NHS3 518 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF501Q96CX3 271 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 SLAMF6Q96DU3 332 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 CHST11Q9NPF2 352 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 SLC2A8Q9NY64 477 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 KCNAB3O43448 404 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 SSX5O60225 188 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 DAP3P51398 398 aaKnown RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 BIDP55957 195 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF273Q14593 569 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 RNASE10Q5GAN6 216 aaKnown RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 RHOUQ7L0Q8 258 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 PLXDC1Q8IUK5 500 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 OR52H1Q8NGJ2 320 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 PPP1R1CQ8WVI7 109 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 TMEM234Q8WY98 164 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 PBOV1Q9GZY1 135 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 PARD6AQ9NPB6 346 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 B3GAT1Q9P2W7 334 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 PHF3Q92576 2039 aaKnown RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 DISC1C4P0D8 188 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 OPN1LWP04000 364 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF806P0C7X5 589 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 UBBP0CG47 229 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 HRH1P35367 487 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 CLDN6P56747 220 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 RPS27AP62979 156 aaKnown RBP13.19□□□□□ -0.3
ATG4B-220ENST00000482507 UBA52P62987 128 aaKnown RBP13.19□□□□□ -0.3
ATG4B-220ENST00000482507 DNM1P34Q6PK57 102 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 DEGS2Q6QHC5 323 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 C5orf46Q6UWT4 87 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 LYG2Q86SG7 212 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 SLC38A9Q8NBW4 561 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 PLPP5Q8NEB5 264 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 OR1M1Q8NGA1 313 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 OR13C9Q8NGT0 318 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 OR10K1Q8NGX5 313 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 ST8SIA1Q92185 356 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 VRK1Q99986 396 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-220ENST00000482507 NICN1Q9BSH3 213 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 SLC25A32Q9H2D1 315 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 FGF21Q9NSA1 209 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 CYB5R1Q9UHQ9 305 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 KCNK7Q9Y2U2 307 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 A0A0D9SG52 128 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 C9orf170A2RU37 121 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 LIPT2A6NK58 231 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 TMEM200CA6NKL6 621 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 IL2RAP01589 272 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 SLC25A4P12235 298 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 HSD11B1P28845 292 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 AGTR1P30556 359 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 FOXK1P85037 733 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 MEF2DQ14814 521 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 NFAM1Q8NET5 270 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-220ENST00000482507 OR6S1Q8NH40 331 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 STT3BQ8TCJ2 826 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 C5orf34Q96MH7 638 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 PDCD10Q9BUL8 212 aa13.19□□□□□ -0.3
ATG4B-220ENST00000482507 GPN3Q9UHW5 284 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-220ENST00000482507 ASPMQ8IZT6 3477 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 A0A0A6YYD4 124 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 SYT7O43581 403 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 STK17BO94768 372 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 MPZP25189 248 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 MFAP5Q13361 173 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 MOB3CQ70IA8 216 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 FOXRED1Q96CU9 486 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-220ENST00000482507 PRRT1Q99946 306 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 ARPC5LQ9BPX5 153 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 LDAHQ9H6V9 325 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 SERINC1Q9NRX5 453 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 KLHL13Q9P2N7 655 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 BCL2L11O43521 198 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 CD59P13987 128 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 APOBEC1P41238 236 aaKnown RBP13.18□□□□□ -0.3
ATG4B-220ENST00000482507 C17orf67Q0P5P2 114 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF345Q14585 488 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 INPP5JQ15735 1006 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-220ENST00000482507 RAB12Q6IQ22 244 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 OR51E1Q8TCB6 317 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 CASTOR1Q8WTX7 329 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms