RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NDUFA8P51970 172 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 TAS2R31P59538 309 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 TMED1Q13445 227 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 ART3Q13508 389 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 NCF4Q15080 339 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 RBMY1FQ15415 496 aaKnown RBP3.13□□□□□ -1.91
SF3B1-210ENST00000482158 ADNP2Q6IQ32 1131 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 HMGN2P46Q86SG4 172 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 HORMAD1Q86X24 394 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 OR52P1PQ8NH57 321 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 DYNLL2Q96FJ2 89 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 RBBP8Q99708 897 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 TIMM29Q9BSF4 260 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 ZNF442Q9H7R0 627 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 MYEF2Q9P2K5 600 aaKnown RBP3.13□□□□□ -1.91
SF3B1-210ENST00000482158 WIF1Q9Y5W5 379 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 WDR19Q8NEZ3 1342 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 YEATS2Q9ULM3 1422 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 BRCA1P38398 1863 aaKnown RBP3.12□□□□□ -1.91
SF3B1-210ENST00000482158 TRAV19A0A0A6YYK7 116 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 IGHV1-69DA0A0B4J2H0 117 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 A0A1W2PQ67 120 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 GABRR3A8MPY1 467 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 SYCE1LA8MT33 242 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 SLC22A5O76082 557 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 UBCP0CG48 685 aaKnown RBP3.12□□□□□ -1.91
SF3B1-210ENST00000482158 CD70P32970 193 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 POLR2IP36954 125 aaKnown RBP3.12□□□□□ -1.91
SF3B1-210ENST00000482158 CD151P48509 253 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 CACNG7P62955 275 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 KRTAP13-2Q52LG2 175 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 HSP90B2PQ58FF3 399 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-210ENST00000482158 APRG1Q8IVJ8 170 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 IQCF2Q8IXL9 164 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 COMMD1Q8N668 190 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 OR10W1Q8NGF6 305 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 OR51F2Q8NH61 342 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 LILRB4Q8NHJ6 448 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 BTN2A3PQ96KV6 586 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 PIGUQ9H490 435 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 MYOZ1Q9NP98 299 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-210ENST00000482158 UBIAD1Q9Y5Z9 338 aa3.12□□□□□ -1.91
SF3B1-210ENST00000482158 IGHV3OR16-9A0A0B4J2B5 98 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 GOLGA8TH3BQL2 631 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 CDC40O60508 579 aaKnown RBP eCLIP3.11□□□□□ -1.91
SF3B1-210ENST00000482158 GLSO94925 669 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-210ENST00000482158 RCBTB2O95199 551 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 POLR2MP0CAP2 368 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 CD37P11049 281 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 PFN2P35080 140 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 RAD51Q06609 339 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 RPEL1Q2QD12 228 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 OTUD6AQ7L8S5 288 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 FAM122BQ7Z309 247 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 RNF182Q8N6D2 247 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 AGR3Q8TD06 166 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 SGTBQ96EQ0 304 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 OPALINQ96PE5 141 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 DOK1Q99704 481 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 ZNF2Q9BSG1 426 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-210ENST00000482158 SAR1BQ9Y6B6 198 aa3.11□□□□□ -1.91
SF3B1-210ENST00000482158 IGLV2-18A0A075B6J9 118 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 IGKV1-27A0A075B6S5 117 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 IGHV3-72A0A0B4J1Y9 119 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 TRAV40A0A0B4J280 105 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 LRRIQ4A6NIV6 560 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 ZNF850A8MQ14 1090 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 FAM25EA8MYX2 175 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 SUPT3HB4E1H0 165 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 RPL36A-HNRNPH2H7BZ11 118 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 RBBP9O75884 186 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 IGLV3-25P01717 112 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 ZNF688P0C7X2 276 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 RAB7AP51149 207 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 BEX5Q5H9J7 111 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 MICU2Q8IYU8 434 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 LRRC75AQ8NAA5 344 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 OR10G6Q8NH81 332 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 SLC25A46Q96AG3 418 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 LINC00477Q96M19 166 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 JSRP1Q96MG2 331 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-210ENST00000482158 C18orf15Q96N68 181 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 TMEM243Q9BU79 118 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 ING2Q9H160 280 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 MARCOQ9UEW3 520 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-210ENST00000482158 YARS2Q9Y2Z4 477 aaKnown RBP3.1□□□□□ -1.91
SF3B1-210ENST00000482158 S4R3C0 116 aa3.1□□□□□ -1.91
SF3B1-210ENST00000482158 A8MUU9 505 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 NDUFC2-KCTD14E9PQ53 114 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 RRP8O43159 456 aaKnown RBP3.09□□□□□ -1.91
SF3B1-210ENST00000482158 CHST10O43529 356 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 TACSTD2P09758 323 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 CELP19835 753 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 MYCNOSP40205 109 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 CLDN18P56856 261 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 CYP24A1Q07973 514 aa3.09□□□□□ -1.91
SF3B1-210ENST00000482158 WDR82Q6UXN9 313 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms