RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 GPR35Q9HC97 309 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 ZNF71Q9NQZ8 489 aaPredicted RBP17.12■□□□□ 0.33
CCM2-214ENST00000481194 KIR2DS1A0A191URI9 304 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 SLC17A2O00624 439 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 KIR2DS4P43632 304 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 KIR2DS1Q14954 304 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 OR2W3Q7Z3T1 314 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 TUSC5Q8IXB3 177 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 TIMD4Q96H15 378 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 GPA33Q99795 319 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 NICN1Q9BSH3 213 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 AHRRA9YTQ3 701 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 TERTO14746 1132 aaKnown RBP17.12■□□□□ 0.33
CCM2-214ENST00000481194 CTXN2P0C2S0 81 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 IRF3Q14653 427 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 CTF1Q16619 201 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 SYT9Q86SS6 491 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 ASCC1Q8N9N2 400 aaKnown RBP17.12■□□□□ 0.33
CCM2-214ENST00000481194 PTP4A1Q93096 173 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 BARHL1Q9BZE3 327 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 TMEM100Q9NV29 134 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 ERVK-16P61578 105 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 TRILQ7L0X0 811 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 OR1J1Q8NGS3 322 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 A0A0J9YW62 118 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 hCG_1809904A0A1W2PP81 198 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 A0A1W2PPE2 198 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 A0A1W2PR64 198 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 A0A1W2PRV1 198 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 MEIS3P1A6NDR6 274 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 RER1O15258 196 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 DESI1Q6ICB0 168 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 OR5AS1Q8N127 324 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 FNDC9Q8TBE3 224 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 NKX3-1Q99801 234 aaPredicted RBP17.11■□□□□ 0.33
CCM2-214ENST00000481194 IGHMP01871 453 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 GIFP27352 417 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 OR8B8Q15620 311 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 ZNF695Q8IW36 515 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 Q8IYB0 196 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 C1QTNF6Q9BXI9 259 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 NECAP2Q9NVZ3 263 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 SH2D1BO14796 132 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 GRPP07492 148 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 EPXP11678 715 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 MRPS34P82930 218 aaKnown RBP17.11■□□□□ 0.33
CCM2-214ENST00000481194 C1orf185Q5T7R7 199 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 LYPD4Q6UWN0 246 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 BHLHA15Q7RTS1 189 aaPredicted RBP17.11■□□□□ 0.33
CCM2-214ENST00000481194 FKBP14Q9NWM8 211 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 BORCS7-ASMTA0A0B4J1R7 106 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 ZNF354AO60765 605 aaPredicted RBP17.11■□□□□ 0.33
CCM2-214ENST00000481194 RGS11O94810 467 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 CD1AP06126 327 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 ELK1P19419 428 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 DMKNQ6E0U4 476 aaPredicted RBP17.11■□□□□ 0.33
CCM2-214ENST00000481194 TMEM38BQ9NVV0 291 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 LUZP4Q9P127 313 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 A6NIN4 97 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 TMEM229AB2RXF0 380 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 ZNF774Q6NX45 483 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 SLC38A9Q8NBW4 561 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 BHLHE23Q8NDY6 225 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 OR51J1Q9H342 316 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 RNF167Q9H6Y7 350 aa17.11■□□□□ 0.33
CCM2-214ENST00000481194 CRYBB2P43320 205 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 AKR1C2P52895 323 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 STEAP1BQ6NZ63 245 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 FAM122AQ96E09 287 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 TAS2R5Q9NYW4 299 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 MRPS18CQ9Y3D5 142 aaKnown RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 PMF1-BGLAPU3KQ54 211 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 SERPINE2P07093 398 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 UMODP07911 640 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 FAM157BP0CG42 384 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 TBPP20226 339 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 PSMB1P20618 241 aaKnown RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 APEX1P27695 318 aaKnown RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 UTS2BQ765I0 119 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 RIMS4Q9H426 269 aaPredicted RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 MRM2Q9UI43 246 aaKnown RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 DNASE1P24855 282 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 SRPXP78539 464 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 ZMYND11Q15326 602 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 TSEN54Q7Z6J9 526 aaKnown RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 GCNT2Q8N0V5 402 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 RND1Q92730 232 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 NTN1O95631 604 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 KNG1P01042 644 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 PRKACAP17612 351 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 SELENOPP49908 381 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 ZNF239Q16600 458 aaKnown RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 HAS2Q92819 552 aa17.1■□□□□ 0.33
CCM2-214ENST00000481194 SLC25A21Q9BQT8 299 aaPredicted RBP17.1■□□□□ 0.33
CCM2-214ENST00000481194 PAN3Q58A45 887 aaKnown RBP17.09■□□□□ 0.33
CCM2-214ENST00000481194 C1orf174Q8IYL3 243 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 FBLIM1Q8WUP2 373 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 C9orf172C9J069 976 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 DLL1O00548 723 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 CATR1Q13166 79 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms