RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 EXOSC3Q9NQT5 275 aaKnown RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 DIABLOQ9NR28 239 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 TMEM9Q9P0T7 183 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 CES1P1Q9UKY3 287 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 FARSAQ9Y285 508 aaKnown RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 TMEM131LA2VDJ0 1609 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 EIF3AQ14152 1382 aaKnown RBP6.65□□□□□ -1.35
LSM5-210ENST00000480956 SPATA31E1Q6ZUB1 1445 aa6.65□□□□□ -1.35
LSM5-210ENST00000480956 TRBV5-4A0A0C4DH59 114 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 IGLV5-39A0A0G2JS06 123 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 B4DXG7 233 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ICOSLGO75144 302 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 PTTG1O95997 202 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 TYMSP04818 313 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 KLK3P07288 261 aaPredicted RBP6.64□□□□□ -1.35
LSM5-210ENST00000480956 GSK3BP49841 420 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 EFNA3P52797 238 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SPCS3P61009 180 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 PSME3P61289 254 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 PUDPQ08623 228 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 Q0VFX4 171 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 PRPSAP1Q14558 356 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SLC1A5Q15758 541 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 LINC00242Q5T6M2 205 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 C10orf25Q5T742 122 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 FAM219BQ5XKK7 198 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SAXO2Q658L1 398 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 FAM92BQ6ZTR7 304 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 GDPD3Q7L5L3 318 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SLC51BQ86UW2 128 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.64□□□□□ -1.35
LSM5-210ENST00000480956 PXT1Q8NFP0 134 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 OR5AR1Q8NGP9 310 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 LNX1Q8TBB1 728 aaPredicted RBP6.64□□□□□ -1.35
LSM5-210ENST00000480956 RAB8BQ92930 207 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 RBP7Q96R05 134 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SCAND2PQ9GZW5 306 aaPredicted RBP6.64□□□□□ -1.35
LSM5-210ENST00000480956 LIME1Q9H400 295 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ZNF442Q9H7R0 627 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 UBR1Q8IWV7 1749 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 CEMIPQ8WUJ3 1361 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SMCHD1A6NHR9 2005 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 TRPM1Q7Z4N2 1603 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ARHGAP31Q2M1Z3 1444 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 EFCAB9A8MZ26 197 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 SLC16A7O60669 478 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 EIF3GO75821 320 aaKnown RBP eCLIP6.64□□□□□ -1.35
LSM5-210ENST00000480956 NGFP01138 241 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 TSHBP01222 138 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 GABRG2P18507 467 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 HRH1P35367 487 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 KIR2DS4P43632 304 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 FOXG1P55316 489 aaPredicted RBP6.64□□□□□ -1.35
LSM5-210ENST00000480956 BIDP55957 195 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 HECTD2Q5U5R9 776 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 RIMKLAQ8IXN7 391 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ZNRF1Q8ND25 227 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 OR2V1Q8NHB1 315 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ACTRT1Q8TDG2 376 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ARPC1AQ92747 370 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ANKRD9Q96BM1 317 aaPredicted RBP6.64□□□□□ -1.35
LSM5-210ENST00000480956 COL21A1Q96P44 957 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 PSMB7Q99436 277 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 VAT1Q99536 393 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 TEAD3Q99594 435 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 NMUR2Q9GZQ4 415 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 RBM38Q9H0Z9 239 aaKnown RBP6.64□□□□□ -1.35
LSM5-210ENST00000480956 ASB7Q9H672 318 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 FBXO7Q9Y3I1 522 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 MAPK8IP3Q9UPT6 1336 aa6.64□□□□□ -1.35
LSM5-210ENST00000480956 ABCC11Q96J66 1382 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 NEXMIFQ5QGS0 1516 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 A0A1B0GWB2 263 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 IDH3BO43837 385 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 CTDNEP1O95476 244 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 CD8AP01732 235 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 CRYAAP02489 173 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 MELTFP08582 738 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 CCDC166P0CW27 439 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 RBMY1CP0DJD4 496 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 HTR1DP28221 377 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 MPGP29372 298 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 RPA3P35244 121 aaPredicted RBP6.63□□□□□ -1.35
LSM5-210ENST00000480956 DVL1P1P54792 670 aaPredicted RBP6.63□□□□□ -1.35
LSM5-210ENST00000480956 ZNF726P1Q15940 193 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 TTLL9Q3SXZ7 439 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 PARP15Q460N3 678 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 PRSS41Q7RTY9 318 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 TMED4Q7Z7H5 227 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 OR2T11Q8NH01 316 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 RNF138Q8WVD3 245 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 TMED6Q8WW62 240 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 TMEM234Q8WY98 164 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 HOXD1Q9GZZ0 328 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 IL1RAPQ9NPH3 570 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 TESMINQ9Y4I5 508 aa6.63□□□□□ -1.35
LSM5-210ENST00000480956 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
LSM5-210ENST00000480956 F6UB75 175 aa6.62□□□□□ -1.35
LSM5-210ENST00000480956 NPIPB9F8W1W9 429 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms