RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 HPSE2Q8WWQ2 592 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 SLC25A44Q96H78 314 aaPredicted RBP9.52□□□□□ -0.89
SIK3-210ENST00000480468 C5orf34Q96MH7 638 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 AMELYQ99218 206 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 CDCA3Q99618 268 aaPredicted RBP9.52□□□□□ -0.89
SIK3-210ENST00000480468 PRO1933Q9H354 126 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 METTL8Q9H825 291 aaKnown RBP9.52□□□□□ -0.89
SIK3-210ENST00000480468 PLEKHA2Q9HB19 425 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 FBLN5Q9UBX5 448 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 DAPP1Q9UN19 280 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 SLC22A13Q9Y226 551 aa9.52□□□□□ -0.89
SIK3-210ENST00000480468 DCDC2BA2VCK2 349 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 NME2P1O60361 137 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SMIM10L1P0DMW3 83 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 MYOGP15173 224 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 FGF7P21781 194 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 TMEM33P57088 247 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 S100A10P60903 97 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SPEM2Q0P670 501 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 MGAT2Q10469 447 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 CCINQ13939 588 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 ELOBQ15370 118 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SLC9A3R2Q15599 337 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 ZNF74Q16587 644 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 MEP1BQ16820 701 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SLC22A6Q4U2R8 563 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 HIKESHIQ53FT3 197 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SLC22A25Q6T423 547 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 TMEM184AQ6ZMB5 413 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 DPPA2Q7Z7J5 298 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 CATSPERDQ86XM0 798 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 JAGN1Q8N5M9 183 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 ARRDC3Q96B67 414 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SMIM10Q96HG1 83 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 GINS3Q9BRX5 216 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SLC2A4RGQ9NR83 387 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 C19orf12Q9NSK7 152 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SUSD2Q9UGT4 822 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 IGKV1D-42A0A075B6H8 117 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.51□□□□□ -0.89
SIK3-210ENST00000480468 GPR89AB7ZAQ6 455 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 CTSVO60911 334 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SNRNP200O75643 2136 aaKnown RBP9.51□□□□□ -0.89
SIK3-210ENST00000480468 BPNT1O95861 308 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 GPR89BP0CG08 455 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SPTBP11277 2137 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 GDI1P31150 447 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 CAMLGP49069 296 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 DNASE1L1P49184 302 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 NUBP1P53384 320 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 CASP6P55212 293 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 RPS15AP62244 130 aaKnown RBP9.51□□□□□ -0.89
SIK3-210ENST00000480468 ZNF616Q08AN1 781 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 OR8G1Q15617 311 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 PRICKLE4Q2TBC4 344 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 NPSR1Q6W5P4 371 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 LRRC69Q6ZNQ3 347 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SUMF2Q8NBJ7 301 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 CHST4Q8NCG5 386 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SMARCD2Q92925 531 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 NKX3-1Q99801 234 aaPredicted RBP9.51□□□□□ -0.89
SIK3-210ENST00000480468 SLC46A2Q9BY10 475 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 GRHPRQ9UBQ7 328 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 PRODH2Q9UF12 536 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 MMP24Q9Y5R2 645 aa9.51□□□□□ -0.89
SIK3-210ENST00000480468 CENPFP49454 3210 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 BORCS7-ASMTA0A0B4J1R7 106 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 TLCD2A6NGC4 264 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 DVL1O14640 695 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 B3GALT2O43825 422 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 DEDDO75618 318 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 PNPP00491 289 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 HCKP08631 526 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 RPS2P15880 293 aaKnown RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 PEBP1P30086 187 aaKnown RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 METAP1P53582 386 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 ADPRHP54922 357 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 QRFPP83859 136 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 CDK3Q00526 305 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 RUNX2Q13950 521 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 SLC18B1Q6NT16 456 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 TTLL10Q6ZVT0 673 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 FAM219AQ8IW50 185 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 ZNF101Q8IZC7 436 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 OR4D6Q8NGJ1 314 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 OR52E1Q8NGJ3 308 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 OR51A2Q8NGJ7 313 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 RNASEH2CQ8TDP1 164 aaKnown RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 Q8WTZ3 238 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 SLC25A43Q8WUT9 341 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 CTHRC1Q96CG8 243 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 PRRX2Q99811 253 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 RTBDNQ9BSG5 229 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 LYRM4Q9HD34 91 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 TUBD1Q9UJT1 453 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 HHLA2Q9UM44 414 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 WASF3Q9UPY6 502 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms