RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 GPR84Q9NQS5 396 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 ZNF275Q9NSD4 429 aaPredicted RBP10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 ELOVL5Q9NYP7 299 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 JKAMPQ9P055 326 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 ZNF319Q9P2F9 582 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 CKLFQ9UBR5 152 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 FOXJ3Q9UPW0 622 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 OSGIN2Q9Y236 505 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 N6AMT1Q9Y5N5 214 aa10.4□□□□□ -0.74
TM9SF4-206ENST00000479591 SHANK1Q9Y566 2161 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 A0A075B6Q4 140 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 LOC100509620A0A075B734 347 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 A0A1W2PPK0 400 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 LOC390937A0A1W2PQ73 354 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 C5orf49A4QMS7 147 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 OR5H1A6NKK0 313 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 DHRS7CA6NNS2 312 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 EEF1E1-BLOC1S5C9J1V9 151 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 J3QW42 95 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 ATXN7O15265 892 aaPredicted RBP10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 EEF1E1O43324 174 aaKnown RBP10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 XRCC2O43543 280 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 TMEM127O75204 238 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 MTRF1O75570 445 aaKnown RBP10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 ZNF14P17017 642 aaPredicted RBP10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 FSTP19883 344 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 MAGEB1P43366 347 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 PSMD7P51665 324 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 HGFACQ04756 655 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 HNRNPA0Q13151 305 aaKnown RBP10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 MRPL49Q13405 166 aaKnown RBP10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 TSC22D1Q15714 1073 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 TIMM23BQ5SRD1 257 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 STAC2Q6ZMT1 411 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 FAM169BQ8N8A8 192 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 PLPP7Q8NBV4 271 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 SLC30A7Q8NEW0 376 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 STEAP2Q8NFT2 490 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 C10orf35Q96D05 121 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 CRNNQ9UBG3 495 aaPredicted RBP10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 PMF1-BGLAPU3KQ54 211 aa10.39□□□□□ -0.75
TM9SF4-206ENST00000479591 PRRC2CQ9Y520 2896 aaKnown RBP10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 ANKRD61A6NGH8 418 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 H3BSH0 61 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 DHRS3O75911 302 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 IGKV3-15P01624 115 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 CLEC2LP0C7M8 214 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 CCNOP22674 350 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 GFOD2Q3B7J2 385 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 SNAI3Q3KNW1 292 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 SSX8Q7RTT4 187 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 SERPINA12Q8IW75 414 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 PARP16Q8N5Y8 322 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 RELL2Q8NC24 303 aaPredicted RBP10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 OR14K1Q8NGZ2 314 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 ACOT12Q8WYK0 555 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 AKAP1Q92667 903 aaKnown RBP eCLIP10.38□□□□□ -0.753e-17■■■□□ 17.4
TM9SF4-206ENST00000479591 APOBEC3DQ96AK3 386 aaPredicted RBP10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 SGK3Q96BR1 496 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 FAM71F1Q96KD3 344 aaPredicted RBP10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 BARHL1Q9BZE3 327 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 OR10A4Q9H209 315 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 ZCCHC4Q9H5U6 513 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 OPA3Q9H6K4 179 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 PLEKHA1Q9HB21 404 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 V9GYS6 101 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 DSPP15924 2871 aaKnown RBP10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 TLN1Q9Y490 2541 aaKnown RBP10.38□□□□□ -0.75
TM9SF4-206ENST00000479591 MEGF11A6BM72 1044 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 NOTOA8MTQ0 251 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 CCL21O00585 134 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 ICMTO60725 284 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 ZNF20P17024 532 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 IGFBP3P17936 291 aaPredicted RBP10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 IDH3GP51553 393 aaPredicted RBP10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 PPP3R1P63098 170 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 MALLQ13021 153 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 DYNC1I2Q13409 638 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 C3orf36Q3SXR2 165 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 CEP78Q5JTW2 689 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 SFXN4Q6P4A7 337 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 PGAP1Q75T13 922 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 LRRTM1Q86UE6 522 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 OR5D14Q8NGL3 314 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 TBC1D15Q8TC07 691 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 SPSB4Q96A44 273 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 S100PBPQ96BU1 408 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 FGGYQ96C11 551 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 MUCL1Q96DR8 90 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 REEP6Q96HR9 211 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 LYZL4Q96KX0 146 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 COQ3Q9NZJ6 369 aa10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 PLEKHB1Q9UF11 243 aaPredicted RBP10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 AK6Q9Y3D8 172 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-206ENST00000479591 PEX16Q9Y5Y5 336 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms