RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 LRCH1Q9Y2L9 728 aa17.11■□□□□ 0.33
ACTB-210ENST00000477812 CMAHPQ9Y471 501 aa17.11■□□□□ 0.33
ACTB-210ENST00000477812 POLQO75417 2590 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 ITPR2Q14571 2701 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 LOC110117498-PIK3R3F6TDL0 507 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 IGLV3-1P01715 115 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 CD8AP01732 235 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 SOD3P08294 240 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 PSMB10P40306 273 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 FABP6P51161 128 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 GABARAPL2P60520 117 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 ZNF92Q03936 586 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 GK2Q14410 553 aaPredicted RBP17.1■□□□□ 0.33
ACTB-210ENST00000477812 HLXQ14774 488 aaPredicted RBP17.1■□□□□ 0.33
ACTB-210ENST00000477812 C11orf71Q6IPW1 123 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 C20orf204Q6ZNR8 217 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 LRP11Q86VZ4 500 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 CATSPERDQ86XM0 798 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 OR5L1Q8NGL2 311 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 OR2AE1Q8NHA4 323 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 NRGNQ92686 78 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 SGK3Q96BR1 496 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 MYCBPQ99417 103 aaPredicted RBP17.1■□□□□ 0.33
ACTB-210ENST00000477812 PBOV1Q9GZY1 135 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 MOB1AQ9H8S9 216 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 SP140LQ9H930 580 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 BRD7Q9NPI1 651 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 PTTG3PQ9NZH4 202 aa17.1■□□□□ 0.33
ACTB-210ENST00000477812 MYEF2Q9P2K5 600 aaKnown RBP17.1■□□□□ 0.33
ACTB-210ENST00000477812 E9PI62 339 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 RGS10O43665 173 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 CLPTM1O96005 669 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 TTRP02766 147 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 MT-ND2P03891 347 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 TACSTD2P09758 323 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 NANOS3P60323 173 aaKnown RBP17.09■□□□□ 0.33
ACTB-210ENST00000477812 SWI5Q1ZZU3 235 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 ZNF718Q3SXZ3 478 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 WDR38Q5JTN6 314 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 PRSS48Q7RTY5 328 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 ELMOD2Q8IZ81 293 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 MUC15Q8N387 334 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 PRSS35Q8N3Z0 413 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 KLHL36Q8N4N3 616 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 NANOGP1Q8N7R0 232 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 SYNPRQ8TBG9 265 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 SPRYD4Q8WW59 207 aaPredicted RBP17.09■□□□□ 0.33
ACTB-210ENST00000477812 PPP1R14AQ96A00 147 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 HAVCR1Q96D42 359 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 PGAM5Q96HS1 289 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 LYZL4Q96KX0 146 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 TRAF4Q9BUZ4 470 aaPredicted RBP17.09■□□□□ 0.33
ACTB-210ENST00000477812 OR10A2Q9H208 303 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 LIME1Q9H400 295 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 PLK3Q9H4B4 646 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 LSM2Q9Y333 95 aaKnown RBP17.09■□□□□ 0.33
ACTB-210ENST00000477812 N6AMT1Q9Y5N5 214 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
ACTB-210ENST00000477812 CACNA1DQ01668 2161 aa17.08■□□□□ 0.33
ACTB-210ENST00000477812 A0A0U1RQV5 110 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 XRCC2O43543 280 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 LALBAP00709 142 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 IGHV3-13P01766 116 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 MT-ND5P03915 603 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 RAC2P15153 192 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 KIR3DL2P43630 455 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 EVX1P49640 407 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 PRSS12P56730 875 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 PSG7Q13046 419 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 KCTD21Q4G0X4 260 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 BCL2L15Q5TBC7 163 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 XAF1Q6GPH4 301 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 PAMR1Q6UXH9 720 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 TMPRSS11AQ6ZMR5 421 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 FBXL14Q8N1E6 418 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 OR2G2Q8NGZ5 317 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 RPS4Y2Q8TD47 263 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 CMBLQ96DG6 245 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 SYT3Q9BQG1 590 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 REPIN1Q9BWE0 567 aaKnown RBP17.08■□□□□ 0.32
ACTB-210ENST00000477812 RGCCQ9H4X1 137 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 FAIMQ9NVQ4 179 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 CHCHD3Q9NX63 227 aaKnown RBP17.08■□□□□ 0.32
ACTB-210ENST00000477812 OR52A1Q9UKL2 312 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 SLC22A13Q9Y226 551 aa17.08■□□□□ 0.32
ACTB-210ENST00000477812 hCG_38984A0A1B0GV85 526 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 TBX1O43435 398 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 KITLGP21583 273 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 TGM4P49221 684 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 KLF3P57682 345 aaPredicted RBP17.07■□□□□ 0.32
ACTB-210ENST00000477812 MALLQ13021 153 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 MRPL28Q13084 256 aaKnown RBP17.07■□□□□ 0.32
ACTB-210ENST00000477812 ALKBH6Q3KRA9 238 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 REEP6Q96HR9 211 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 OPA3Q9H6K4 179 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 CBLN4Q9NTU7 201 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 FRRS1LQ9P0K9 344 aa17.07■□□□□ 0.32
ACTB-210ENST00000477812 ARFGEF3Q5TH69 2177 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 DSCAMO60469 2012 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 CSMD2Q7Z408 3487 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms