RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PTBP3O95758 552 aaKnown RBP9.45□□□□□ -0.9
HDLBP-236ENST00000477477 FABP3P05413 133 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 MDKP21741 143 aaPredicted RBP9.45□□□□□ -0.9
HDLBP-236ENST00000477477 CA6P23280 308 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 RRM2P31350 389 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 OTX1P32242 354 aaPredicted RBP9.45□□□□□ -0.9
HDLBP-236ENST00000477477 NPY4RP50391 375 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDLBP-236ENST00000477477 TSPAN31Q12999 210 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 OR8G1Q15617 311 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 KCNJ8Q15842 424 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 SNAI3Q3KNW1 292 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 HSP90B2PQ58FF3 399 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 SLC35F1Q5T1Q4 408 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 GPR157Q5UAW9 335 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 PGBD2Q6P3X8 592 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 GNPDA2Q8TDQ7 276 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 SPTSSAQ969W0 71 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 MCUR1Q96AQ8 359 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 TMIGD2Q96BF3 282 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 TECTBQ96PL2 329 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 ELAC2Q9BQ52 826 aaKnown RBP9.45□□□□□ -0.9
HDLBP-236ENST00000477477 ADAT1Q9BUB4 502 aaKnown RBP9.45□□□□□ -0.9
HDLBP-236ENST00000477477 MMADHCQ9H3L0 296 aaPredicted RBP9.45□□□□□ -0.9
HDLBP-236ENST00000477477 FN3KRPQ9HA64 309 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 MED4Q9NPJ6 270 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 RNF7Q9UBF6 113 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 MMP24Q9Y5R2 645 aa9.45□□□□□ -0.9
HDLBP-236ENST00000477477 SRRM5B3KS81 715 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 GMDSO60547 372 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 HSD17B1P14061 328 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 ZNF823P16415 610 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 ANOS1P23352 680 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 OMGP23515 440 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 PYCR1P32322 319 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 CFHR2P36980 270 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 RPS27P42677 84 aaKnown RBP9.44□□□□□ -0.9
HDLBP-236ENST00000477477 BPIFB3P59826 476 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 ZNF92Q03936 586 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 RUSC1-AS1Q66K80 236 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 DRAM2Q6UX65 266 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 TREML4Q6UXN2 200 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 CYB561A3Q8NBI2 242 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 PLPP7Q8NBV4 271 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 PROKR2Q8NFJ6 384 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 OR52L1Q8NGH7 329 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 OR2AE1Q8NHA4 323 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 NSMCE2Q96MF7 247 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 DDOQ99489 341 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 PCGF1Q9BSM1 259 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 NSRP1Q9H0G5 558 aaKnown RBP9.44□□□□□ -0.9
HDLBP-236ENST00000477477 EGLN3Q9H6Z9 239 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 IL1RAPQ9NPH3 570 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 NOX4Q9NPH5 578 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 MRPL15Q9P015 296 aaKnown RBP9.44□□□□□ -0.9
HDLBP-236ENST00000477477 ERVK-18Q9QC07 812 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 CDH10Q9Y6N8 788 aa9.44□□□□□ -0.9
HDLBP-236ENST00000477477 C5orf63A6NC05 138 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 GGT3PA6NGU5 568 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 TVP23AA6NH52 213 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 ZNF879B4DU55 563 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 P2RY10O00398 339 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 BHLHE40O14503 412 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 TNFRSF13BO14836 293 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-236ENST00000477477 ARPC2O15144 300 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 LIPFP07098 398 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 SFTPBP07988 381 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 PSKH1P11801 424 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 MMP9P14780 707 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 OR8B8Q15620 311 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 SAMD4BQ5PRF9 694 aaKnown RBP9.43□□□□□ -0.9
HDLBP-236ENST00000477477 GLYATL3Q5SZD4 288 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 CD276Q5ZPR3 534 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 SFRP4Q6FHJ7 346 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-236ENST00000477477 RPL13AP3Q6NVV1 102 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 LYPD4Q6UWN0 246 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 Q6YL49 198 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 ZDHHC21Q8IVQ6 265 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 PGAM4Q8N0Y7 254 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 BOLLQ8N9W6 283 aaKnown RBP9.43□□□□□ -0.9
HDLBP-236ENST00000477477 OR4C15Q8NGM1 316 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 OR2T4Q8NH00 348 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 ZNRF4Q8WWF5 429 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 TBX15Q96SF7 602 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 OPA3Q9H6K4 179 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 MARCH7Q9H992 704 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 SMURF1Q9HCE7 757 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 TRIM36Q9NQ86 728 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 KIF17Q9P2E2 1029 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 CD300AQ9UGN4 299 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 COMMD3-BMI1R4GMX3 469 aa9.43□□□□□ -0.9
HDLBP-236ENST00000477477 TRAV38-1A0A0B4J264 116 aa9.42□□□□□ -0.9
HDLBP-236ENST00000477477 A0A1B0GUS0 222 aa9.42□□□□□ -0.9
HDLBP-236ENST00000477477 OOEPA6NGQ2 149 aa9.42□□□□□ -0.9
HDLBP-236ENST00000477477 ADAM20O43506 726 aa9.42□□□□□ -0.9
HDLBP-236ENST00000477477 NDUFA2O43678 99 aa9.42□□□□□ -0.9
HDLBP-236ENST00000477477 TOX4O94842 621 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms