RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 CPOQ8IVL8 374 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 PARP8Q8N3A8 854 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 OR5K1Q8NHB7 308 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
COMMD6-209ENST00000477377 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 COPS4Q9BT78 406 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 TMPRSS13Q9BYE2 586 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 MMADHCQ9H3L0 296 aaPredicted RBP13.08□□□□□ -0.32
COMMD6-209ENST00000477377 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.32
COMMD6-209ENST00000477377 COL6A5A8TX70 2615 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 CCDC182A6NF36 153 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 F5H0A9 414 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 PHF1O43189 567 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 SELENOFO60613 162 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 PTBP3O95758 552 aaKnown RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 HMGN1P05114 100 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 SBK2P0C263 348 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 EPHA2P29317 976 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 OPRL1P41146 370 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 GATA4P43694 442 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 SLC6A9P48067 706 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 RASSF2P50749 326 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 HOXA4Q00056 320 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 PTGES3Q15185 160 aaKnown RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 ZNF181Q2M3W8 571 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 TMEM155Q4W5P6 130 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 KLHL12Q53G59 568 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 RHOUQ7L0Q8 258 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 SGK3Q96BR1 496 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 GAL3ST1Q99999 423 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 ZNF556Q9HAH1 456 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 TMEM165Q9HC07 324 aa13.07□□□□□ -0.32
COMMD6-209ENST00000477377 PAPOLBQ9NRJ5 636 aaKnown RBP13.07□□□□□ -0.32
COMMD6-209ENST00000477377 TRAV20A0A0B4J274 112 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 CYB5R3P00387 301 aaPredicted RBP13.06□□□□□ -0.32
COMMD6-209ENST00000477377 CD200P41217 278 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 BTG1P62324 171 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 GRB2P62993 217 aaKnown RBP13.06□□□□□ -0.32
COMMD6-209ENST00000477377 MALLQ13021 153 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 AMIGO2Q86SJ2 522 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 MOGAT3Q86VF5 341 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 OTOSQ8NHW6 89 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 OTULINQ96BN8 352 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 RAB39BQ96DA2 213 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 GABARAPL1Q9H0R8 117 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 PATZ1Q9HBE1 687 aaKnown RBP13.06□□□□□ -0.32
COMMD6-209ENST00000477377 TVP23BQ9NYZ1 205 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 OPN4Q9UHM6 478 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 POLR3KQ9Y2Y1 108 aaPredicted RBP13.06□□□□□ -0.32
COMMD6-209ENST00000477377 AP4S1Q9Y587 144 aa13.06□□□□□ -0.32
COMMD6-209ENST00000477377 ISPDA4D126 451 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 PRR32B1ATL7 298 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 PRODHO43272 600 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 ZNF205O95201 554 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 ANPEPP15144 967 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 HNF1AP20823 631 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 CA6P23280 308 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 CX3CR1P49238 355 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 SRP9P49458 86 aaKnown RBP13.05□□□□□ -0.32
COMMD6-209ENST00000477377 HCCSP53701 268 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 FAM3AP98173 230 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 MPPED2Q15777 294 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 KRTAP24-1Q3LI83 254 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 SLC35D3Q5M8T2 416 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 KDM4DQ6B0I6 523 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 SHFQ7M4L6 423 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 MRPL21Q7Z2W9 205 aaKnown RBP13.05□□□□□ -0.32
COMMD6-209ENST00000477377 PEG10Q86TG7 708 aaKnown RBP13.05□□□□□ -0.32
COMMD6-209ENST00000477377 PHC2Q8IXK0 858 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 CELF2-AS1Q8N7Q2 184 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 Q8TCH9 128 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 DNAJC9Q8WXX5 260 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 LRTOMTQ8WZ04 291 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 TOR3AQ9H497 397 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 MMP26Q9NRE1 261 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 UBAP1Q9NZ09 502 aa13.05□□□□□ -0.32
COMMD6-209ENST00000477377 TRAPPC2LH3BP13 241 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 PRKYO43930 277 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 FSTL3O95633 263 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 PNPP00491 289 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 WNT2P09544 360 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 ALOX5APP20292 161 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 PAICSP22234 425 aaKnown RBP13.04□□□□□ -0.32
COMMD6-209ENST00000477377 ZNF121P58317 390 aaPredicted RBP13.04□□□□□ -0.32
COMMD6-209ENST00000477377 TAF13Q15543 124 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 PRAMEF6Q5VXH4 476 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 FAHD2BQ6P2I3 314 aaPredicted RBP13.04□□□□□ -0.32
COMMD6-209ENST00000477377 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 BCDIN3DQ7Z5W3 292 aaKnown RBP13.04□□□□□ -0.32
COMMD6-209ENST00000477377 OR56B2PQ8NGI1 322 aa13.04□□□□□ -0.32
COMMD6-209ENST00000477377 SPRYD4Q8WW59 207 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms