RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MPIG6BO95866 241 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 LHBP01229 141 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 ACSM4P0C7M7 580 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4L2P0CJ85 424 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4L3P0CJ86 424 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4L4P0CJ87 422 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4L5P0CJ88 424 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4L6P0CJ89 424 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4L7P0CJ90 424 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 SAA4P35542 130 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 SLC9A3P48764 834 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 KLRD1Q13241 179 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 NSUN5P1Q3KNT7 163 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 TEX36Q5VZQ5 186 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 CORO6Q6QEF8 472 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-213ENST00000476777 ZNF826PQ6ZT77 177 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 PGAP1Q75T13 922 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 PNKDQ8N490 385 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 GCSAMQ8N6F7 178 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 Q8N7P7 452 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 OR4S1Q8NGB4 309 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 OR4C13Q8NGP0 309 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 SPRYD4Q8WW59 207 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-213ENST00000476777 TNFRSF14Q92956 283 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 SLCO4A1Q96BD0 722 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 PRRC1Q96M27 445 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 C7orf26Q96N11 449 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 ZNF570Q96NI8 536 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 SLC22A4Q9H015 551 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 MMP28Q9H239 520 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 RERGLQ9H628 205 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 NMNAT1Q9HAN9 279 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-213ENST00000476777 C1orf123Q9NWV4 160 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 VSX1Q9NZR4 365 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DNAJB11Q9UBS4 358 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 DUX4Q9UBX2 424 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 RPS6KA6Q9UK32 745 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 POLR1DQ9Y2S0 133 aa9.29□□□□□ -0.92
BRCA1-213ENST00000476777 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 IGHV3OR15-7A0A075B7D8 119 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 MEIOCA2RUB1 952 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 MEGF11A6BM72 1044 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 CD300LBA8K4G0 201 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 H3BUX3 64 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 CDC42EP2O14613 210 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 ANGPT2O15123 496 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 GMDSO60547 372 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 VSIG10L2P0DP72 767 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 ELF3P78545 371 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-213ENST00000476777 EMX1Q04741 257 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-213ENST00000476777 KRR1Q13601 381 aaKnown RBP9.28□□□□□ -0.92
BRCA1-213ENST00000476777 NFYCQ13952 458 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 MEP1BQ16820 701 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 CRIP3Q6Q6R5 217 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 NAA40Q86UY6 237 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 CMTM4Q8IZR5 234 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 BEND2Q8NDZ0 799 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 OR2T6Q8NHC8 308 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 C17orf50Q8WW18 174 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 ADAT1Q9BUB4 502 aaKnown RBP9.28□□□□□ -0.92
BRCA1-213ENST00000476777 NUAK2Q9H093 628 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 RABEP2Q9H5N1 569 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 RANBP3Q9H6Z4 567 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-213ENST00000476777 NKIRAS1Q9NYS0 192 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 NOP16Q9Y3C1 178 aaKnown RBP9.28□□□□□ -0.92
BRCA1-213ENST00000476777 MAB21L2Q9Y586 359 aa9.28□□□□□ -0.92
BRCA1-213ENST00000476777 LOC100653049A0A140TA62 436 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 F5H5K5 113 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 FBXO24O75426 580 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 KRT34O76011 436 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 LCATP04180 440 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 SDHAP31040 664 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 UBE2E1P51965 193 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 MALLQ13021 153 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 LY6EQ16553 131 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 ZBED5Q49AG3 693 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 CYBRD1Q53TN4 286 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 NANOGP8Q6NSW7 305 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 CCBE1Q6UXH8 406 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-213ENST00000476777 CFAP77Q6ZQR2 320 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 PTCHD4Q6ZW05 846 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-213ENST00000476777 CROCCP2Q86T23 111 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 OFCC1Q8IZS5 231 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 OR4F17Q8NGA8 305 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 ACOT11Q8WXI4 607 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-213ENST00000476777 R3HDM4Q96D70 268 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 AJUBAQ96IF1 538 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 WWC2-AS2Q96NR7 200 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 OR4F4Q96R69 305 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 CCL13Q99616 98 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 SSX3Q99909 188 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 RHCGQ9UBD6 479 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 AURKCQ9UQB9 309 aa9.27□□□□□ -0.93
BRCA1-213ENST00000476777 hCG_1807616A0A1W2PRN6 198 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 A6NLC8 198 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 DCTN6O00399 190 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms