RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	GRB2	P62993	217 aa	Known RBP	13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	TAF13	Q15543	124 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	SNAPC1	Q16533	368 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	KLHL12	Q53G59	568 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	SLC35D3	Q5M8T2	416 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	CCDC121	Q6ZUS5	278 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	PGAP1	Q75T13	922 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	SHF	Q7M4L6	423 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	PRSS45	Q7RTY3	260 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	ZDHHC13	Q8IUH4	622 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	OTOS	Q8NHW6	89 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	LPAR2	Q9HBW0	351 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	GCM1	Q9NP62	436 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	KRT84	Q9NSB2	600 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	TMEM100	Q9NV29	134 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	KLHDC2	Q9Y2U9	406 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	NPTN	Q9Y639	398 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	ZAR1L	A6NP61	321 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	CD300LB	A8K4G0	201 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580		M0R129	80 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	PRKY	O43930	277 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	MSMB	P08118	114 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	NAA10	P41227	235 aa	Predicted RBP	13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	CX3CR1	P49238	355 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	ACTR3	P61158	418 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	EFNB1	P98172	346 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	MAB21L1	Q13394	359 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	SLX4IP	Q5VYV7	408 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	MRPL21	Q7Z2W9	205 aa	Known RBP	13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	PYDC1	Q8WXC3	89 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	SPSB4	Q96A44	273 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	CENPN	Q96H22	339 aa	Predicted RBP	13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	PLEKHA8	Q96JA3	519 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	SEMA6A	Q9H2E6	1030 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	TOR3A	Q9H497	397 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	PPP1R3C	Q9UQK1	317 aa		13.95	□□□□□ -0.18
VPS8-222	ENST00000475580	IGHV3-64D	A0A0J9YX35	117 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	TMEM178B	H3BS89	294 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	PMEL	P40967	661 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	SLC15A1	P46059	708 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	APOF	Q13790	326 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	KPNB1	Q14974	876 aa	Known RBP	13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	C12orf73	Q69YU5	71 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	RHOU	Q7L0Q8	258 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	GLCCI1	Q86VQ1	547 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	ZNF454	Q8N9F8	522 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	TMEM186	Q96B77	213 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	TEX12	Q9BXU0	123 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	HIF1AN	Q9NWT6	349 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	ZNF319	Q9P2F9	582 aa		13.94	□□□□□ -0.18
VPS8-222	ENST00000475580	ISPD	A4D126	451 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580		H3BNX3	289 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	LYN	P07948	512 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	ALOX5AP	P20292	161 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	HSD11B1	P28845	292 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	GATA4	P43694	442 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	SRP9	P49458	86 aa	Known RBP	13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	HCCS	P53701	268 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	RAD23A	P54725	363 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	ZNF121	P58317	390 aa	Predicted RBP	13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	RPS7	P62081	194 aa	Known RBP	13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	ZMYND11	Q15326	602 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	PEG10	Q86TG7	708 aa	Known RBP	13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	OR51F2	Q8NH61	342 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	SGK3	Q96BR1	496 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	RAB39B	Q96DA2	213 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	TEAD3	Q99594	435 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	CIB1	Q99828	191 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	GAL3ST1	Q99999	423 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	G6PC2	Q9NQR9	355 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	DNAJC27	Q9NZQ0	273 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	OAZ3	Q9UMX2	235 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	N6AMT1	Q9Y5N5	214 aa		13.93	□□□□□ -0.18
VPS8-222	ENST00000475580	GGT3P	A6NGU5	568 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	SAC3D1	A6NKF1	404 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	PRR32	B1ATL7	298 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	XRCC2	O43543	280 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	PLPP2	O43688	288 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	ANXA2	P07355	339 aa	Known RBP	13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	SBK2	P0C263	348 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	SRD5A1	P18405	259 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	CA6	P23280	308 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	POLR2I	P36954	125 aa	Known RBP	13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	CD200	P41217	278 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	BTG1	P62324	171 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	TMEM155	Q4W5P6	130 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	AADACL4	Q5VUY2	407 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	FAM57B	Q71RH2	274 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	SLC16A9	Q7RTY1	509 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	MOGAT3	Q86VF5	341 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	LRRC28	Q86X40	367 aa	Predicted RBP	13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	CELF2-AS1	Q8N7Q2	184 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	TCEANC	Q8N8B7	351 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	OR56B2P	Q8NGI1	322 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	THEM6	Q8WUY1	208 aa		13.92	□□□□□ -0.18
VPS8-222	ENST00000475580	MDFI	Q99750	246 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms