RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 NUFIP2Q7Z417 695 aaKnown RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CEACAM19Q7Z692 300 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CD163Q86VB7 1156 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 TMEM200AQ86VY9 491 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CATSPERDQ86XM0 798 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 SERPINA12Q8IW75 414 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 SKA3Q8IX90 412 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 DMRTC2Q8IXT2 367 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 LRRC18Q8N456 261 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CNEP1R1Q8N9A8 125 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 C9orf106Q8NAJ2 232 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 OR5D14Q8NGL3 314 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 OR1K1Q8NGR3 316 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 HSD17B8Q92506 261 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 BCL2L2Q92843 193 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 NABP1Q96AH0 204 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 STARD4Q96DR4 205 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 MUCL1Q96DR8 90 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CPNE2Q96FN4 548 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 MAP6Q96JE9 813 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CMTM3Q96MX0 182 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 DACH2Q96NX9 599 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CHCHD6Q9BRQ6 235 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 OR2H1Q9GZK4 316 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 DCSTAMPQ9H295 470 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 KCNJ16Q9NPI9 418 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 TXNL4BQ9NX01 149 aaKnown RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 FRRS1LQ9P0K9 344 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 NUFIP1Q9UHK0 495 aaKnown RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 ST6GALNAC2Q9UJ37 374 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 EDARQ9UNE0 448 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 FOXJ3Q9UPW0 622 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 AMDHD2Q9Y303 409 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 LRP12Q9Y561 859 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 LHFPL6Q9Y693 200 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 MAP1AP78559 2803 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 A0A075B6Q4 140 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 LOC100506127A0A0U1RQW1 187 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PNMA8CA0A1B0GUJ8 204 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 A0A1B0GVI7 797 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 A8MXE2 369 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 F5H5K5 113 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 GABRPO00591 440 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 RER1O15258 196 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 XRCC2O43543 280 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SYT7O43581 403 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 DNAJC13O75165 2243 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SC5DO75845 299 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TOXO94900 526 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ZFPL1O95159 310 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 CGAP01215 116 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ERCC1P07992 297 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 UCHL1P09936 223 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 OCM2P0CE71 109 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 CBR1P16152 277 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF32P17041 273 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SRMP19623 302 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PSMB1P20618 241 aaKnown RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 GADD45AP24522 165 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 OTX1P32242 354 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 S100A5P33763 92 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 APLNRP35414 380 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 DDOSTP39656 456 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SCAND1P57086 179 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PSG4Q00888 419 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PMPCAQ10713 525 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 MALLQ13021 153 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 DOC2BQ14184 412 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 GABRA6Q16445 453 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 GSG1Q2KHT4 349 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 HSD17B12Q53GQ0 312 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 CCDC92Q53HC0 331 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ZMAT1Q5H9K5 638 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TIMM23BQ5SRD1 257 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SFRP5Q5T4F7 317 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ZBTB37Q5TC79 503 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 RTL6Q6ICC9 239 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 DOK3Q7L591 496 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SSX6Q7RTT6 188 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 BTLAQ7Z6A9 289 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 Q8N3U1 123 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 FTMTQ8N4E7 242 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF433Q8N7K0 673 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF283Q8N7M2 679 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 S100ZQ8WXG8 99 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 AKAP1Q92667 903 aaKnown RBP eCLIP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TMEM203Q969S6 136 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 FBXO17Q96EF6 278 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 C4orf45Q96LM5 186 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TECTBQ96PL2 329 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TSC22D3Q99576 134 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TMED9Q9BVK6 235 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PBOV1Q9GZY1 135 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 OR51E2Q9H255 320 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 C12orf49Q9H741 205 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TCF7L1Q9HCS4 588 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 EMC7Q9NPA0 242 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 NGBQ9NPG2 151 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms