RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NSMCE2Q96MF7 247 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 ATF6BQ99941 703 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 MRI1Q9BV20 369 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 HCAR1Q9BXC0 346 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 NMNAT2Q9BZQ4 307 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 NDEL1Q9GZM8 345 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 FAM107BQ9H098 131 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 RASSF4Q9H2L5 321 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PRDM13Q9H4Q3 707 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PPP1R3EQ9H7J1 279 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 UFSP2Q9NUQ7 469 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 VNN3Q9NY84 501 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 IL20Q9NYY1 176 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 OR5V1Q9UGF6 321 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 MAGEL2Q9UJ55 1249 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 TMCC3Q9ULS5 477 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 LYVE1Q9Y5Y7 322 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 TRAV40A0A0B4J280 105 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 TCRBV5S2A0A599 114 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 LRRC30A6NM36 301 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 M0R135 149 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 LHBP01229 141 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 HLA-DQA2P01906 255 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 GYPBP06028 91 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 SFTPBP07988 381 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 CLUP10909 449 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 SLC2A1P11166 492 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 MMP9P14780 707 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 OMGP23515 440 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 NOS3P29474 1203 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 MAGEA2P43356 314 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 PITPNBP48739 271 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 FGF12P61328 243 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 GNB2P62879 340 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 ELF3P78545 371 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 RELBQ01201 579 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 MS4A2Q01362 244 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 SRSF4Q08170 494 aaKnown RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 POU4F2Q12837 409 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 FOXL1Q12952 345 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 DEFB112Q30KQ8 113 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 SAMD4BQ5PRF9 694 aaKnown RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 LINC01590Q5TEZ4 76 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 DNM1P34Q6PK57 102 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 BRD3OSQ6XYD6 125 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 DCDC5Q6ZRR9 648 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 ZNF826PQ6ZT77 177 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 PRSS45Q7RTY3 260 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 PIGWQ7Z7B1 504 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 WDR86Q86TI4 376 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 ZDHHC21Q8IVQ6 265 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 DEFB107AQ8IZN7 70 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 SLC37A3Q8NCC5 494 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 OR9Q2Q8NGE9 314 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 OR9Q1Q8NGQ5 310 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 OR2AJ1Q8NGZ0 328 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 OR4Q3Q8NH05 313 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 GNPDA2Q8TDQ7 276 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 SPRYD4Q8WW59 207 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 ERGIC1Q969X5 290 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 MCUR1Q96AQ8 359 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 ZMYND19Q96E35 227 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 NEIL1Q96FI4 390 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 ZNF799Q96GE5 643 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 NUDT16L1Q9BRJ7 211 aaKnown RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 TRIM15Q9C019 465 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 MS4A7Q9GZW8 240 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 UNKLQ9H9P5 680 aaKnown RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 SMURF1Q9HCE7 757 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 KRCC1Q9NPI7 259 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-207ENST00000475549 ZNF319Q9P2F9 582 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 CDH10Q9Y6N8 788 aa5.83□□□□□ -1.48
HDAC3-207ENST00000475549 A0A1B0GW55 424 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-207ENST00000475549 TNFRSF11BO00300 401 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 ZNF593O00488 134 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-207ENST00000475549 HOXA3O43365 443 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-207ENST00000475549 GMNNO75496 209 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 KRT36O76013 467 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 DUX4L2P0CJ85 424 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 DUX4L3P0CJ86 424 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 DUX4L4P0CJ87 422 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 DUX4L5P0CJ88 424 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 DUX4L6P0CJ89 424 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 DUX4L7P0CJ90 424 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 ATP6V1B2P21281 511 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 MDKP21741 143 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-207ENST00000475549 IFNGR2P38484 337 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 PRKXP51817 358 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 TPTEP56180 551 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 CRMP1Q14194 572 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 SLC36A3Q495N2 470 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 RUSC1-AS1Q66K80 236 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 C16orf87Q6PH81 154 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 DUX4L9Q6RFH8 374 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-207ENST00000475549 SHISA2Q6UWI4 295 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 BTNL3Q6UXE8 466 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 CYP2R1Q6VVX0 501 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 Q6YL49 198 aa5.82□□□□□ -1.48
HDAC3-207ENST00000475549 RASSF6Q6ZTQ3 369 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms