RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 A8MV72 311 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-216ENST00000475195 WNT9BO14905 357 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 MLNRO43193 412 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 PPIHO43447 177 aaKnown RBP13.93□□□□□ -0.18
ATG4B-216ENST00000475195 XRCC2O43543 280 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 CRLF1O75462 422 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 LMO4P61968 165 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 RPS7P62081 194 aaKnown RBP13.93□□□□□ -0.18
ATG4B-216ENST00000475195 SLC3A1Q07837 685 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 GLYATL3Q5SZD4 288 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 LCN1P1Q5VSP4 162 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 BCDIN3DQ7Z5W3 292 aaKnown RBP13.93□□□□□ -0.18
ATG4B-216ENST00000475195 TRUB1Q8WWH5 349 aaKnown RBP13.93□□□□□ -0.18
ATG4B-216ENST00000475195 CCL17Q92583 94 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 SGK3Q96BR1 496 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 HRASLS5Q96KN8 279 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 OPA3Q9H6K4 179 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 NIPAL2Q9H841 368 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 YAE1D1Q9NRH1 226 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 H2AFY2Q9P0M6 372 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-216ENST00000475195 KLHDC2Q9Y2U9 406 aa13.93□□□□□ -0.18
ATG4B-216ENST00000475195 DYSFO75923 2080 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 SLC22A31A6NKX4 558 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 CD300LBA8K4G0 201 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 CLDN25C9JDP6 229 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 H0YL77 283 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 H2BFMP0C1H6 154 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 SLC2A1P11166 492 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 HSD11B1P28845 292 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 DCTDP32321 178 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 CX3CR1P49238 355 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 ALDH3A2P51648 485 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 HCCSP53701 268 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 ROM1Q03395 351 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 KRTAP21-3Q3LHN1 58 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 SPATC1Q76KD6 591 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 CELF2-AS1Q8N7Q2 184 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 OR52H1Q8NGJ2 320 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 OR8J1Q8NGP2 316 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 OR2AE1Q8NHA4 323 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 CLDND2Q8NHS1 167 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 RAB1CQ92928 201 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 OR2V2Q96R30 315 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 IL4I1Q96RQ9 567 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 SLC22A4Q9H015 551 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 ZNF319Q9P2F9 582 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 WIPI2Q9Y4P8 454 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 TMEM14AQ9Y6G1 99 aa13.92□□□□□ -0.18
ATG4B-216ENST00000475195 IFNL4K9M1U5 179 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 EI24O14681 340 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 DDOSTP39656 456 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 NAA10P41227 235 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-216ENST00000475195 GATA4P43694 442 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 RAD23AP54725 363 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 ZNF121P58317 390 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-216ENST00000475195 FAM3AP98173 230 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 MAB21L1Q13394 359 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 TMED1Q13445 227 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 SLC25A30Q5SVS4 291 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 KCTD18Q6PI47 426 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-216ENST00000475195 MRPL21Q7Z2W9 205 aaKnown RBP13.91□□□□□ -0.18
ATG4B-216ENST00000475195 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-216ENST00000475195 GID4Q8IVV7 300 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 PQLC1Q8N2U9 271 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 LINC01356Q8N9X3 169 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 BHLHE23Q8NDY6 225 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 ITLN1Q8WWA0 313 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 MEGF10Q96KG7 1140 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 MNTQ99583 582 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 RIBC2Q9H4K1 309 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 GCM1Q9NP62 436 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 TMEM106BQ9NUM4 274 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 MRPL15Q9P015 296 aaKnown RBP13.91□□□□□ -0.18
ATG4B-216ENST00000475195 LAMP5Q9UJQ1 280 aa13.91□□□□□ -0.18
ATG4B-216ENST00000475195 LOC100289279A0A1B0GTE1 492 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 ACOD1A6NK06 481 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 M0R129 80 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 GMDSO60547 372 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 LMX1BO60663 402 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 ZNF254O75437 659 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 FSTL3O95633 263 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 PTBP3O95758 552 aaKnown RBP13.9□□□□□ -0.18
ATG4B-216ENST00000475195 TGFAP01135 160 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 SRP9P49458 86 aaKnown RBP13.9□□□□□ -0.18
ATG4B-216ENST00000475195 CDH15P55291 814 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 PRSS12P56730 875 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 ZNF181Q2M3W8 571 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 FAM166AQ6J272 317 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 LRRN1Q6UXK5 716 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 KRT74Q7RTS7 529 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 CBR4Q8N4T8 237 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 ASB17Q8WXJ9 295 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 ERGIC1Q969X5 290 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 TIMD4Q96H15 378 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 SIGLEC11Q96RL6 698 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 SLC29A1Q99808 456 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 C9orf16Q9BUW7 83 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 RGCCQ9H4X1 137 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 ADGRL4Q9HBW9 690 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 TREM2Q9NZC2 230 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms