RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ATP6V1G2O95670 118 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 IGHA1P01876 353 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 MT-ND5P03915 603 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 CSF3P09919 207 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 DBTP11182 482 aaKnown RBP14.42□□□□□ -0.1
SCAF11-206ENST00000474828 NAT2P11245 290 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 SELEP16581 610 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 HSD11B1P28845 292 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF92Q03936 586 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 MALLQ13021 153 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 NKPD1Q17RQ9 610 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 ZMAT1Q5H9K5 638 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 GLYATL3Q5SZD4 288 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 Q6ZSR3 168 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 SPATC1Q76KD6 591 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 SSX6Q7RTT6 188 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 KRT77Q7Z794 578 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF283Q8N7M2 679 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 SETD9Q8NE22 299 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 OR8G5Q8NG78 346 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 RNF166Q96A37 237 aaPredicted RBP14.42□□□□□ -0.1
SCAF11-206ENST00000474828 SGK3Q96BR1 496 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 LGALS12Q96DT0 336 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 RNFT2Q96EX2 444 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 VRK1Q99986 396 aaPredicted RBP14.42□□□□□ -0.1
SCAF11-206ENST00000474828 SLC30A2Q9BRI3 323 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 PTTG3PQ9NZH4 202 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 MRM2Q9UI43 246 aaKnown RBP14.42□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF391Q9UJN7 358 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 PCDHGB1Q9Y5G3 927 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 C2CD3Q4AC94 2353 aa14.42□□□□□ -0.1
SCAF11-206ENST00000474828 A0A096LNT2 108 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 A0A0U1RQV5 110 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 VWC2LB2RUY7 222 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF670-ZNF695F2Z2N8 137 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 NDUFS8O00217 210 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 CLIC3O95833 236 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 IGHV1-46P01743 117 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ERCC1P07992 297 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-206ENST00000474828 GNAO1P09471 354 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 GIFP27352 417 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 SLC6A9P48067 706 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF81P51508 661 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ACTC1P68032 377 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ACTA1P68133 377 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF85Q03923 595 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 RAB40BQ12829 278 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 CLEC12BQ2HXU8 276 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 LAIR2Q6ISS4 152 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF771Q7L3S4 317 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-206ENST00000474828 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-206ENST00000474828 ZNF786Q8N393 782 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 SNX33Q8WV41 574 aa14.41□□□□□ -0.1
SCAF11-206ENST00000474828 GTF3AQ92664 365 aaKnown RBP14.41□□□□□ -0.1
SCAF11-206ENST00000474828 FLNAP21333 2647 aaKnown RBP14.4□□□□□ -0.1
SCAF11-206ENST00000474828 PLSCR5A0PG75 271 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 SSX4O60224 188 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 NCR1O76036 304 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 SLC2A1P11166 492 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 CFL1P23528 166 aaKnown RBP14.4□□□□□ -0.1
SCAF11-206ENST00000474828 DDOSTP39656 456 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 RIDAP52758 137 aaKnown RBP14.4□□□□□ -0.1
SCAF11-206ENST00000474828 FAM3AP98173 230 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 OR8B8Q15620 311 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 CDONQ4KMG0 1287 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 OR2T2Q6IF00 324 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 PGAP1Q75T13 922 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 KCTD20Q7Z5Y7 419 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 ACBD7Q8N6N7 88 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 C10orf105Q8TEF2 133 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 CYGBQ8WWM9 190 aa14.4□□□□□ -0.1
SCAF11-206ENST00000474828 FGF20Q9NP95 211 aaPredicted RBP14.4□□□□□ -0.1
SCAF11-206ENST00000474828 NUFIP1Q9UHK0 495 aaKnown RBP14.4□□□□□ -0.1
SCAF11-206ENST00000474828 RPL36Q9Y3U8 105 aaKnown RBP14.4□□□□□ -0.1
SCAF11-206ENST00000474828 hCG_38984A0A1B0GV85 526 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 LOC390937A0A1W2PQ73 354 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 CD300LBA8K4G0 201 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 TIMM8AO60220 97 aaPredicted RBP14.39□□□□□ -0.11
SCAF11-206ENST00000474828 LILRA1O75019 489 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 RP2O75695 350 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 LY6HO94772 140 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 PTBP3O95758 552 aaKnown RBP14.39□□□□□ -0.11
SCAF11-206ENST00000474828 PNPP00491 289 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 HPXP02790 462 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 DAOP14920 347 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 FOSL1P15407 271 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 CRYBB2P43320 205 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 MAGEB1P43366 347 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 AQP4P55087 323 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 IL5RAQ01344 420 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 TNK1Q13470 666 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 RIN1Q13671 783 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 FDX2Q6P4F2 183 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 ZNF525Q8N782 197 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 OR8B12Q8NGG6 310 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 OR13G1Q8NGZ3 307 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 OR2AE1Q8NHA4 323 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 Q96MF0 132 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 OR10A2Q9H208 303 aa14.39□□□□□ -0.11
SCAF11-206ENST00000474828 TPK1Q9H3S4 243 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms