RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 MPPED2Q15777 294 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF404Q494X3 552 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 GLYATL3Q5SZD4 288 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 PGAP1Q75T13 922 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 TMEM179BQ7Z7N9 219 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 ADGRG5Q8IZF4 528 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 CELF2-AS1Q8N7Q2 184 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 CCDC197Q8NCU1 140 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 Q8TCH9 128 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 FAM216AQ8WUB2 273 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 POP5Q969H6 163 aaKnown RBP15.53■□□□□ 0.08
COL7A1-209ENST00000474432 SPTSSAQ969W0 71 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 ASB9Q96DX5 294 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 REEP1Q9H902 201 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 BAIAP2Q9UQB8 552 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 LRCH1Q9Y2L9 728 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 ENTPD1P49961 510 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 MALLQ13021 153 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 FAM98BQ52LJ0 330 aaKnown RBP15.52■□□□□ 0.08
COL7A1-209ENST00000474432 PRAMEF6Q5VXH4 476 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 DRAM2Q6UX65 266 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 LYPD2Q6UXB3 125 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 KLBQ86Z14 1044 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 OR2T33Q8NG76 320 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 OR10G2Q8NGC3 310 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 SLAMF6Q96DU3 332 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 FEVQ99581 238 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 SUCNR1Q9BXA5 334 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 C1orf21Q9H246 121 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF69Q9UC07 566 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 AUP1Q9Y679 476 aa15.52■□□□□ 0.08
COL7A1-209ENST00000474432 TMEM89A2RUT3 159 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 ZNF593O00488 134 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-209ENST00000474432 FAM20BO75063 409 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 SPARCP09486 303 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 RAP2AP10114 183 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 SLC2A1P11166 492 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 CA6P23280 308 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 CPT2P23786 658 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 FMO3P31513 532 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 COMPP49747 757 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-209ENST00000474432 PRKXP51817 358 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 ESCO2Q56NI9 601 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 ZNF841Q6ZN19 808 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 MRPL21Q7Z2W9 205 aaKnown RBP15.51■□□□□ 0.07
COL7A1-209ENST00000474432 BCL6BQ8N143 479 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-209ENST00000474432 IQCF1Q8N6M8 205 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 C19orf18Q8NEA5 215 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 CCDC124Q96CT7 223 aaKnown RBP15.51■□□□□ 0.07
COL7A1-209ENST00000474432 KCNJ15Q99712 375 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 CHID1Q9BWS9 393 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 SSBP3Q9BWW4 388 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-209ENST00000474432 MED20Q9H944 212 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 CMC2Q9NRP2 79 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 PPIAL4AQ9Y536 164 aa15.51■□□□□ 0.07
COL7A1-209ENST00000474432 DHRS12A0PJE2 317 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 FAM183AA6NL82 134 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 RPS2P15880 293 aaKnown RBP15.5■□□□□ 0.07
COL7A1-209ENST00000474432 PRSS45Q7RTY3 260 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 BPIFB2Q8N4F0 458 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 CANT1Q8WVQ1 401 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 SPRYD4Q8WW59 207 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-209ENST00000474432 ERGIC1Q969X5 290 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 SPSB4Q96A44 273 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 NEIL1Q96FI4 390 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-209ENST00000474432 C1orf147Q96MC9 270 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-209ENST00000474432 ZNF48Q96MX3 618 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-209ENST00000474432 AMELYQ99218 206 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 MARCH7Q9H992 704 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 UFSP2Q9NUQ7 469 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 MIOXQ9UGB7 285 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 NUP50Q9UKX7 468 aa15.5■□□□□ 0.07
COL7A1-209ENST00000474432 LRRC30A6NM36 301 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 TRIM77I1YAP6 450 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 TNFRSF13BO14836 293 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-209ENST00000474432 CFPP27918 469 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 GRK5P34947 590 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 PSMB10P40306 273 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 OR8G1Q15617 311 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 C12orf54Q6X4T0 127 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 SIGLECL1Q8N7X8 197 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 GIPC3Q8TF64 312 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 JMJD8Q96S16 334 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 COPS4Q9BT78 406 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 THTPAQ9BU02 230 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 CENPMQ9NSP4 180 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 OR5V1Q9UGF6 321 aa15.49■□□□□ 0.07
COL7A1-209ENST00000474432 SOX21Q9Y651 276 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-209ENST00000474432 IGHV2-70DA0A0C4DH43 119 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 ARRDC5A6NEK1 342 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 ZNF878C9JN71 531 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 HAX1O00165 279 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 GMDSO60547 372 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 CST1P01037 141 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 FPR2P25090 351 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 UBA52P62987 128 aaKnown RBP15.48■□□□□ 0.07
COL7A1-209ENST00000474432 GK3PQ14409 553 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 SPATC1Q76KD6 591 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 DOK3Q7L591 496 aa15.48■□□□□ 0.07
COL7A1-209ENST00000474432 TIGD4Q8IY51 512 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms