RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 KIAA0141Q14154 515 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 RHEBQ15382 184 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 MARCH3Q86UD3 253 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 ARRDC1Q8N5I2 433 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 ZNF615Q8N8J6 731 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 OR9K2Q8NGE7 335 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 ZNF524Q96C55 264 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 PRDM13Q9H4Q3 707 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 SLC17A4Q9Y2C5 497 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 LTBP2Q14767 1821 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 ZNF264O43296 627 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 RABIFP47224 123 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 SPEM2Q0P670 501 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 SSX9Q7RTT3 188 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 NKAIN3Q8N8D7 197 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 SLC25A43Q8WUT9 341 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 ASB16Q96NS5 453 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 G6PC3Q9BUM1 346 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 FBXL17Q9UF56 701 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 TBC1D29Q9UFV1 150 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 EMC9Q9Y3B6 208 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 H0YGG7 62 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 NME2P1O60361 137 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 ARF3P61204 181 aaPredicted RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 KCTD18Q6PI47 426 aaPredicted RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 FIGLAQ6QHK4 219 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 DMRTC2Q8IXT2 367 aaPredicted RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 IER2Q9BTL4 223 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 ABHD6Q9BV23 337 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 EIF5A2Q9GZV4 153 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 Q9N2J8 555 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 CREBZFQ9NS37 354 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 TBX21Q9UL17 535 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 HEBP2Q9Y5Z4 205 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 CT45A8P0DMV1 189 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 CT45A9P0DMV2 189 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 CT45A2Q5DJT8 189 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 CBLN3Q6UW01 205 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 HEPN1Q6WQI6 88 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 BCORP1Q8N888 145 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 MRPL43Q8N983 215 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 TAAR8Q969N4 342 aa16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 GAS2L1Q99501 681 aaPredicted RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 MRPS23Q9Y3D9 190 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-214ENST00000474289 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 CEACAM18A8MTB9 384 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 C11orf98E9PRG8 122 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 XKRYO14609 159 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 JTBO76095 146 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 OR6A2O95222 327 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 VSIG8P0DPA2 414 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 S100A2P29034 98 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 MAS1LP35410 378 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 THBS4P35443 961 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 QRFPP83859 136 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 CCINQ13939 588 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 CLINT1Q14677 625 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 CD226Q15762 336 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 MAMDC2Q7Z304 686 aaPredicted RBP16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 YPEL4Q96NS1 127 aa16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 CCNL2Q96S94 520 aaPredicted RBP16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 GAR1Q9NY12 217 aaKnown RBP16.58■□□□□ 0.25
ECHDC1-214ENST00000474289 GAPDHP04406 335 aaKnown RBP16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 CD63P08962 238 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 RPL12P30050 165 aaKnown RBP16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 GDI1P31150 447 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 RPS23P62266 143 aaKnown RBP16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 ZNF574Q6ZN55 896 aaPredicted RBP16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 CD300LFQ8TDQ1 290 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 RERGQ96A58 199 aaPredicted RBP16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 SLC22A18Q96BI1 424 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 ZFYVE21Q9BQ24 234 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 RTBDNQ9BSG5 229 aaPredicted RBP16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 SMIM3Q9BZL3 60 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 HDGFL3Q9Y3E1 203 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 VCANP13611 3396 aa16.58■□□□□ 0.24
ECHDC1-214ENST00000474289 TNFSF14O43557 240 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 SLC16A7O60669 478 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 SRSF10O75494 262 aaKnown RBP16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 APBB3O95704 486 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 ZNF708P17019 499 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 ACTR1BP42025 376 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 CLDN6P56747 220 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 ZNF616Q08AN1 781 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 ACTBL2Q562R1 376 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 FAM3CQ92520 227 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 KLHDC3Q9BQ90 382 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 K7EPK0 472 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 PRKNO60260 465 aaPredicted RBP16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 SFTPBP07988 381 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 RPS10P46783 165 aaKnown RBP16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 UCP2P55851 309 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 FAM3AP98173 230 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 ZP2Q05996 745 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 FAM71E2Q8N5Q1 922 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 OR52N4Q8NGI2 321 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 OR10G6Q8NH81 332 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 MEGF10Q96KG7 1140 aa16.57■□□□□ 0.24
ECHDC1-214ENST00000474289 NICN1Q9BSH3 213 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms