RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 DPY19L4Q7Z388 723 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 ERI1Q8IV48 349 aaKnown RBP9.42□□□□□ -0.9
CKS1B-206ENST00000474215 KLHL36Q8N4N3 616 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 SPICQ8N5J4 248 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 UTP4Q969X6 686 aaKnown RBP9.42□□□□□ -0.9
CKS1B-206ENST00000474215 SIGLEC11Q96RL6 698 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 INTS14Q96SY0 518 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 ABHD6Q9BV23 337 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 OR51V1Q9H2C8 321 aa9.42□□□□□ -0.9
CKS1B-206ENST00000474215 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 A0A0G2JMP0 313 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 IGHV3-64DA0A0J9YX35 117 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 A0A0X1KG70 313 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 C5orf63A6NC05 138 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 GGT3PA6NGU5 568 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 LRRC30A6NM36 301 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 J3QLI3 93 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 GMDSO60547 372 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 TIPRLO75663 272 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 SLC2A1P11166 492 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 CA6P23280 308 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 GATA3P23771 443 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 MDH2P40926 338 aaKnown RBP9.41□□□□□ -0.9
CKS1B-206ENST00000474215 GRB2P62993 217 aaKnown RBP9.41□□□□□ -0.9
CKS1B-206ENST00000474215 LCN2P80188 198 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 GLYATL3Q5SZD4 288 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 DCAF12L2Q5VW00 463 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 LIPNQ5VXI9 398 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 TMEM236Q5W0B7 351 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 SHFQ7M4L6 423 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 MOGAT3Q86VF5 341 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 CPOQ8IVL8 374 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 TIGD4Q8IY51 512 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 RFLNBQ8N5W9 214 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 TEX29Q8N6K0 151 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 CELF2-AS1Q8N7Q2 184 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 OR4M2Q8NGB6 313 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 OR6N2Q8NGY6 317 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 OR2AE1Q8NHA4 323 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF420Q8TAQ5 688 aaPredicted RBP9.41□□□□□ -0.9
CKS1B-206ENST00000474215 RNF133Q8WVZ7 376 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 DNAJC9Q8WXX5 260 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 PLEKHA8Q96JA3 519 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 TEX12Q9BXU0 123 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 SLC22A4Q9H015 551 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 MMADHCQ9H3L0 296 aaPredicted RBP9.41□□□□□ -0.9
CKS1B-206ENST00000474215 TOR3AQ9H497 397 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 METTL17Q9H7H0 456 aaPredicted RBP9.41□□□□□ -0.9
CKS1B-206ENST00000474215 PATZ1Q9HBE1 687 aaKnown RBP9.41□□□□□ -0.9
CKS1B-206ENST00000474215 NOP16Q9Y3C1 178 aaKnown RBP9.41□□□□□ -0.9
CKS1B-206ENST00000474215 N6AMT1Q9Y5N5 214 aa9.41□□□□□ -0.9
CKS1B-206ENST00000474215 PPIAL4EA0A075B759 164 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 PPIAL4CA0A0B4J2A2 164 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 PPIAL4DF5H284 164 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 PRODHO43272 600 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 FOXH1O75593 365 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 AVPP01185 164 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 APOC1P02654 83 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 PPIAL4FP0DN26 164 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 ANOS1P23352 680 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 ZFP36P26651 326 aaKnown RBP9.4□□□□□ -0.9
CKS1B-206ENST00000474215 HSD11B1P28845 292 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 PMELP40967 661 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 CD200P41217 278 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 GATA4P43694 442 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 CX3CR1P49238 355 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 CRISP1P54107 249 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 RAD23AP54725 363 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 MAB21L1Q13394 359 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 OR8G1Q15617 311 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF181Q2M3W8 571 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 KLHL12Q53G59 568 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 FAHD1Q6P587 224 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
CKS1B-206ENST00000474215 PHC2Q8IXK0 858 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 C1orf87Q8N0U7 546 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 MUC20Q8N307 709 aaPredicted RBP9.4□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF454Q8N9F8 522 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 ERGIC1Q969X5 290 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 SPSB4Q96A44 273 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 ZMYND19Q96E35 227 aaPredicted RBP9.4□□□□□ -0.9
CKS1B-206ENST00000474215 TMPRSS13Q9BYE2 586 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 OPA3Q9H6K4 179 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 SP140LQ9H930 580 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 TMEM165Q9HC07 324 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 SLC25A19Q9HC21 320 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 PAPOLBQ9NRJ5 636 aaKnown RBP9.4□□□□□ -0.9
CKS1B-206ENST00000474215 MRPL15Q9P015 296 aaKnown RBP9.4□□□□□ -0.9
CKS1B-206ENST00000474215 KIF17Q9P2E2 1029 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 CUBNO60494 3623 aa9.4□□□□□ -0.9
CKS1B-206ENST00000474215 SVEP1Q4LDE5 3571 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 XRCC2O43543 280 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 TCF21O43680 179 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF205O95201 554 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 FSTL3O95633 263 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 CYB5R3P00387 301 aaPredicted RBP9.39□□□□□ -0.91
CKS1B-206ENST00000474215 ANXA2P07355 339 aaKnown RBP9.39□□□□□ -0.91
CKS1B-206ENST00000474215 WNT2P09544 360 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 H2BFMP0C1H6 154 aa9.39□□□□□ -0.91
CKS1B-206ENST00000474215 CPT2P23786 658 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms