RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ADH4P08319 380 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 LYNX1P0DP58 116 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 TNFRSF1AP19438 455 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 COL8A2P25067 703 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 NR4A2P43354 598 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 GPR6P46095 362 aaPredicted RBP11.71□□□□□ -0.53
USF1-205ENST00000473969 RIDAP52758 137 aaKnown RBP11.71□□□□□ -0.53
USF1-205ENST00000473969 TMEM33P57088 247 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 ZNF121P58317 390 aaPredicted RBP11.71□□□□□ -0.53
USF1-205ENST00000473969 SNRPGP62308 76 aaKnown RBP11.71□□□□□ -0.53
USF1-205ENST00000473969 CDK5R2Q13319 367 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 SNAI3Q3KNW1 292 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 LRRN1Q6UXK5 716 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 CLEC9AQ6UXN8 241 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 PACRGLQ8N7B6 248 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 Q96MT0 163 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 MBOAT4Q96T53 435 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 AMELYQ99218 206 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 APOL4Q9BPW4 351 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 SLC22A4Q9H015 551 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 FAM118AQ9NWS6 357 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 CLN6Q9NWW5 311 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 PPIHO43447 177 aaKnown RBP11.7□□□□□ -0.54
USF1-205ENST00000473969 NCR1O76036 304 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 CD55P08174 381 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 SBK2P0C263 348 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 OR2T7P0C7T2 308 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 GIFP27352 417 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 DDOSTP39656 456 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 CRYBB2P43320 205 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 SRP9P49458 86 aaKnown RBP11.7□□□□□ -0.54
USF1-205ENST00000473969 CXCR4P61073 352 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 ELF3P78545 371 aaPredicted RBP11.7□□□□□ -0.54
USF1-205ENST00000473969 ZNF92Q03936 586 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 SLC3A1Q07837 685 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 LOXL1Q08397 574 aaPredicted RBP11.7□□□□□ -0.54
USF1-205ENST00000473969 OCLNQ16625 522 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 GFOD2Q3B7J2 385 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 ZNF829Q3KNS6 432 aaPredicted RBP11.7□□□□□ -0.54
USF1-205ENST00000473969 GLYATL3Q5SZD4 288 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 LPCAT4Q643R3 524 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 ZNF322Q6U7Q0 402 aaPredicted RBP11.7□□□□□ -0.54
USF1-205ENST00000473969 ZNF679Q8IYX0 411 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 OR10H4Q8NGA5 316 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 OR2T27Q8NH04 317 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 OR2AE1Q8NHA4 323 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
USF1-205ENST00000473969 BPESC1Q9GZL8 116 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 RGCCQ9H4X1 137 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 ADGRL4Q9HBW9 690 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 IL19Q9UHD0 177 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 KLHDC2Q9Y2U9 406 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 LRP12Q9Y561 859 aa11.7□□□□□ -0.54
USF1-205ENST00000473969 F8P00451 2351 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 TMEM269A0A1B0GVZ9 245 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 ACOD1A6NK06 481 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 CD300LBA8K4G0 201 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 CLDN25C9JDP6 229 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 PSMD9O00233 223 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 ENTPD6O75354 484 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 KRT8P05787 483 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 HEXAP06865 529 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 MTNR1AP48039 350 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 PSMA6P60900 246 aaKnown RBP11.69□□□□□ -0.54
USF1-205ENST00000473969 SNCBQ16143 134 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 TMEM255AQ5JRV8 349 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 TTC23Q5W5X9 447 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 PEG10Q86TG7 708 aaKnown RBP11.69□□□□□ -0.54
USF1-205ENST00000473969 FTMTQ8N4E7 242 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 CCL17Q92583 94 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 UBE2FQ969M7 185 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 REEP6Q96HR9 211 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 OR8B4Q96RC9 309 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 MYCBPQ99417 103 aaPredicted RBP11.69□□□□□ -0.54
USF1-205ENST00000473969 TBX5Q99593 518 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 SLC30A2Q9BRI3 323 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 TTTY10Q9BZA0 68 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 ZNF275Q9NSD4 429 aaPredicted RBP11.69□□□□□ -0.54
USF1-205ENST00000473969 ZNF391Q9UJN7 358 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 GTF2A1LQ9UNN4 478 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 COPS3Q9UNS2 423 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 PCDHGB1Q9Y5G3 927 aa11.69□□□□□ -0.54
USF1-205ENST00000473969 MAP1AP78559 2803 aaPredicted RBP11.69□□□□□ -0.54
USF1-205ENST00000473969 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.68□□□□□ -0.54
USF1-205ENST00000473969 ANKRD30BLA7E2S9 258 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 VWC2LB2RUY7 222 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 SLC16A6O15403 523 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 APOL3O95236 402 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 PEX2P28328 305 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 DCTDP32321 178 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 CHN2P52757 468 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 PRSS12P56730 875 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 IL5RAQ01344 420 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 ROM1Q03395 351 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 EGR3Q06889 387 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 MZT1Q08AG7 82 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms