RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 M1APQ8TC57 530 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 C15orf40Q8WUR7 153 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 SLC25A43Q8WUT9 341 aaPredicted RBP13.26□□□□□ -0.29
UBXN11-213ENST00000472155 LYZL4Q96KX0 146 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 ARRDC1-AS1Q9H2J1 176 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 EXO5Q9H790 373 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 TMEM138Q9NPI0 162 aa13.26□□□□□ -0.29
UBXN11-213ENST00000472155 KIAA1549Q9HCM3 1950 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 F5H5K5 113 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 YKT6O15498 198 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 TCN2P20062 427 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 MECP2P51608 486 aaKnown RBP13.25□□□□□ -0.29
UBXN11-213ENST00000472155 GRK1Q15835 563 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF260Q3ZCT1 412 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 RHBDD1Q8TEB9 315 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 IER2Q9BTL4 223 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 RBM24Q9BX46 236 aaKnown RBP13.25□□□□□ -0.29
UBXN11-213ENST00000472155 DEPPQ9NTK1 212 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 DNAJC13O75165 2243 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 BOD1L1Q8NFC6 3051 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 IGKV1-9A0A0C4DH69 117 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 A0A1W2PNU3 283 aaPredicted RBP13.25□□□□□ -0.29
UBXN11-213ENST00000472155 MEGF11A6BM72 1044 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 GOSR2O14653 212 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 ENDOGQ14249 297 aaKnown RBP13.25□□□□□ -0.29
UBXN11-213ENST00000472155 POU4F3Q15319 338 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 CDNFQ49AH0 187 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 AWAT2Q6E213 333 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF529Q6P280 563 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 OR8H3Q8N146 312 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 MRGPRFQ96AM1 343 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 SELENOIQ9C0D9 397 aa13.25□□□□□ -0.29
UBXN11-213ENST00000472155 DOCK7Q96N67 2140 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 PINLYPA6NC86 204 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 ZNHIT1O43257 154 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 IL5P05113 134 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 PATE4P0C8F1 98 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF35P13682 527 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 RAB3AP20336 220 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 FAUP35544 74 aaKnown RBP13.24□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF93P35789 620 aaPredicted RBP13.24□□□□□ -0.29
UBXN11-213ENST00000472155 CSNK1A1P48729 337 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 DSCR4P56555 118 aaPredicted RBP13.24□□□□□ -0.29
UBXN11-213ENST00000472155 C4orf46Q504U0 113 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 C1QL2Q7Z5L3 287 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 OR9K2Q8NGE7 335 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 OR5D14Q8NGL3 314 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 OR13C8Q8NGS7 320 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 AQP3Q92482 292 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 NABP1Q96AH0 204 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 C1orf147Q96MC9 270 aaPredicted RBP13.24□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF230Q9UIE0 474 aaPredicted RBP13.24□□□□□ -0.29
UBXN11-213ENST00000472155 TCFL5Q9UL49 500 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 ARID1AO14497 2285 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 CACNA1HO95180 2353 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 PMS2P2O95744 297 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 CPN1P15169 458 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF20P17024 532 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 RFC3P40938 356 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 DUSP3P51452 185 aaPredicted RBP13.24□□□□□ -0.29
UBXN11-213ENST00000472155 TRA2AQ13595 282 aaKnown RBP eCLIP13.24□□□□□ -0.29
UBXN11-213ENST00000472155 CRIP3Q6Q6R5 217 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 NKAIN3Q8N8D7 197 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 CT55Q8WUE5 264 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 NTNG2Q96CW9 530 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 MICU1Q9BPX6 476 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 TAS2R8Q9NYW2 309 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 PISDQ9UG56 409 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 LOXL2Q9Y4K0 774 aa13.24□□□□□ -0.29
UBXN11-213ENST00000472155 SOCS1O15524 211 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 RGS11O94810 467 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ITGB2P05107 769 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 SUCLG1P53597 346 aaKnown RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 B3GALT5-AS1P59052 145 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 SIGLEC14Q08ET2 396 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 EXOSC2Q13868 293 aaKnown RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ANGPT1Q15389 498 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF239Q16600 458 aaKnown RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 SFRP5Q5T4F7 317 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 GLIPR1L1Q6UWM5 242 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF767PQ75MW2 155 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF101Q8IZC7 436 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 TMEM123Q8N131 208 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 SLC22A24Q8N4F4 322 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 SPICQ8N5J4 248 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ROBO4Q8WZ75 1007 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ELMOD3Q96FG2 381 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 DSPP15924 2871 aaKnown RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ZNF736B4DX44 427 aaPredicted RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 SSX5O60225 188 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 POU3F2P20265 443 aaPredicted RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 SLC6A9P48067 706 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 TAS2R19P59542 299 aa13.23□□□□□ -0.29
UBXN11-213ENST00000472155 ATPAF1Q5TC12 328 aaPredicted RBP13.23□□□□□ -0.29
UBXN11-213ENST00000472155 CDH24Q86UP0 819 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms