RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 NRASP01111 189 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SPEM2Q0P670 501 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DPY19L2P2Q6ZN68 376 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR8B4Q96RC9 309 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 COX7A2P2O60397 106 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NAGAP17050 411 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MPGP29372 298 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GDF7Q7Z4P5 450 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR2AE1Q8NHA4 323 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PLA2G3Q9NZ20 509 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RAB22AQ9UL26 194 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 POLDIP2Q9Y2S7 368 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF324O75467 553 aaPredicted RBP12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RPLP1P05386 114 aaKnown RBP12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 H3F3AP84243 136 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CORINQ9Y5Q5 1042 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF320A2RRD8 509 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR2W5A6NFC9 320 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ALDOCP09972 364 aaKnown RBP12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SELEP16581 610 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TRMT12Q53H54 448 aaKnown RBP12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DRAM2Q6UX65 266 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SARAFQ96BY9 339 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FLVCR1Q9Y5Y0 555 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RELAQ04206 551 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 HTR4Q13639 388 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 Q499Y3 187 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PGBD5Q8N414 524 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR52I1Q8NGK6 324 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR1L4Q8NGR5 311 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ISL2Q96A47 359 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CSF3RQ99062 836 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GORASP2Q9H8Y8 452 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CTNSO60931 367 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CRISP2P16562 243 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LDLRAD1Q5T700 205 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ADAM5Q6NVV9 412 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR51S1Q8NGJ8 323 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CCL4L1Q8NHW4 92 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LKAAEAR1Q8TD35 194 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 C14orf79Q96F83 325 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PACRGQ96M98 296 aaPredicted RBP12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FBXO8Q9NRD0 319 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KIAA1217Q5T5P2 1943 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FAM24AA6NFZ4 105 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR2C1O95371 312 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RPS27P42677 84 aaKnown RBP12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LIM2P55344 173 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DUSP5Q16690 384 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TIGITQ495A1 244 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CBLL1Q75N03 491 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TRABD2BA6NFA1 517 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLC22A20A6NK97 555 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GPM6AP51674 278 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF90Q03938 601 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SIAH3Q8IW03 269 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LYSMD1Q96S90 227 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PAFAH1B2P68402 229 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GRINAQ7Z429 371 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TM4SF18Q96CE8 201 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 K7EQS6 105 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CXCL13O43927 109 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SBK2P0C263 348 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CLDN15P56746 228 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ADGRE4PQ86SQ3 457 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ARHGEF39Q8N4T4 335 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SEC22CQ9BRL7 303 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 AK3Q9UIJ7 227 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SNX11Q9Y5W9 270 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CASP8AP2Q9UKL3 1982 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 A0A0B4J293 547 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PPP5D1E7EU14 171 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 M0R135 149 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DCTN6O00399 190 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 B4GALT3O60512 393 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TAS2R45P59539 299 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DHODHQ02127 395 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RTP5Q14D33 572 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF799Q96GE5 643 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NDRG4Q9ULP0 352 aaKnown RBP12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLC22A13Q9Y226 551 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLC35E2P0CK97 266 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 B4GALT1P15291 398 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CD200P41217 278 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 BPIFB3P59826 476 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TMEM81Q6P7N7 255 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MRPL37Q9BZE1 423 aaKnown RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 XRCC2O43543 280 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MT-ND4LP03901 98 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KIR2DL1P43626 348 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KIR2DL2P43627 348 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 BTG2P78543 158 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SPCS2Q15005 226 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LAIR1Q6GTX8 287 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RBM45Q8IUH3 476 aaKnown RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RNF141Q8WVD5 230 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms