RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 SHQ1Q6PI26 577 aaKnown RBP11.83□□□□□ -0.52
COMMD3-208ENST00000470045 RHOUQ7L0Q8 258 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 MRPL21Q7Z2W9 205 aaKnown RBP11.83□□□□□ -0.52
COMMD3-208ENST00000470045 TIGD4Q8IY51 512 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 SPICQ8N5J4 248 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 RFLNBQ8N5W9 214 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 CELF2-AS1Q8N7Q2 184 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 RNF133Q8WVZ7 376 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 DNAJC9Q8WXX5 260 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 NRBF2Q96F24 287 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 INTS14Q96SY0 518 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 COPS4Q9BT78 406 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 TMPRSS13Q9BYE2 586 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 PATZ1Q9HBE1 687 aaKnown RBP11.83□□□□□ -0.52
COMMD3-208ENST00000470045 SLC25A19Q9HC21 320 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 TMEM100Q9NV29 134 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 POLR3KQ9Y2Y1 108 aaPredicted RBP11.83□□□□□ -0.52
COMMD3-208ENST00000470045 A0A0G2JMP0 313 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 A0A0X1KG70 313 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 CD300LBA8K4G0 201 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 A8MXK9 166 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 J3QLI3 93 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 PRODHO43272 600 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 AVPP01185 164 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 SBK2P0C263 348 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 PAICSP22234 425 aaKnown RBP11.82□□□□□ -0.52
COMMD3-208ENST00000470045 GSTT1P30711 240 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 MDH2P40926 338 aaKnown RBP11.82□□□□□ -0.52
COMMD3-208ENST00000470045 CD200P41217 278 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 RAD23AP54725 363 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 GRB2P62993 217 aaKnown RBP11.82□□□□□ -0.52
COMMD3-208ENST00000470045 MAB21L1Q13394 359 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 GINS1Q14691 196 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 GLYATL3Q5SZD4 288 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 FAHD1Q6P587 224 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 DPY19L4Q7Z388 723 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 KLHL36Q8N4N3 616 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 OR4M2Q8NGB6 313 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 OR6N2Q8NGY6 317 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 ZNF420Q8TAQ5 688 aaPredicted RBP11.82□□□□□ -0.52
COMMD3-208ENST00000470045 Q8TCH9 128 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 UTP4Q969X6 686 aaKnown RBP11.82□□□□□ -0.52
COMMD3-208ENST00000470045 SPSB4Q96A44 273 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 ABHD6Q9BV23 337 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 TOR3AQ9H497 397 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 OPA3Q9H6K4 179 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 ZNF556Q9HAH1 456 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 UBAP1Q9NZ09 502 aa11.82□□□□□ -0.52
COMMD3-208ENST00000470045 PRR23D1E9PI22 279 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 XRCC2O43543 280 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 FOXH1O75593 365 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 PTBP3O95758 552 aaKnown RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 HLA-DPB1P04440 258 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 HMGN1P05114 100 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 PRR23D2P0DMB1 279 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 SLC2A5P22732 501 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 CPT2P23786 658 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 ZFP36P26651 326 aaKnown RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 POU1F1P28069 291 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 PRKXP51817 358 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 EIF2B1Q14232 305 aaKnown RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 DCAF12L2Q5VW00 463 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 FAHD2BQ6P2I3 314 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 PLBD1Q6P4A8 553 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 SHFQ7M4L6 423 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 PRSS45Q7RTY3 260 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 C1QL2Q7Z5L3 287 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 ERI1Q8IV48 349 aaKnown RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 MUC20Q8N307 709 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 PARP8Q8N3A8 854 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 TEX29Q8N6K0 151 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 FAHD2AQ96GK7 314 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 AMELYQ99218 206 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 SLC22A4Q9H015 551 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 METTL17Q9H7H0 456 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
COMMD3-208ENST00000470045 NOP16Q9Y3C1 178 aaKnown RBP11.81□□□□□ -0.52
COMMD3-208ENST00000470045 CEACAM18A8MTB9 384 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 TIPRLO75663 272 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 CYB5R3P00387 301 aaPredicted RBP11.8□□□□□ -0.52
COMMD3-208ENST00000470045 FSHBP01225 129 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 SLC2A1P11166 492 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 PMELP40967 661 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 OPRL1P41146 370 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 SLC15A1P46059 708 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 RASSF2P50749 326 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 SEC61A1P61619 476 aaKnown RBP11.8□□□□□ -0.52
COMMD3-208ENST00000470045 LCN2P80188 198 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 TAF13Q15543 124 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 ZNF771Q7L3S4 317 aaPredicted RBP11.8□□□□□ -0.52
COMMD3-208ENST00000470045 MOGAT3Q86VF5 341 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 OTOSQ8NHW6 89 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 SPRYD4Q8WW59 207 aaPredicted RBP11.8□□□□□ -0.52
COMMD3-208ENST00000470045 DUS3LQ96G46 650 aaKnown RBP11.8□□□□□ -0.52
COMMD3-208ENST00000470045 OR51V1Q9H2C8 321 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 MMADHCQ9H3L0 296 aaPredicted RBP11.8□□□□□ -0.52
COMMD3-208ENST00000470045 MRPL15Q9P015 296 aaKnown RBP11.8□□□□□ -0.52
COMMD3-208ENST00000470045 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms