RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 N6AMT1Q9Y5N5 214 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 V9GYQ6 96 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 WNK1Q9H4A3 2382 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 IGHV3OR15-7A0A075B7D8 119 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 A0A0U1RQK1 487 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 A0A1B0GW55 424 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 CLPSL1A2RUU4 121 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 CD300LBA8K4G0 201 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 ADAM20O43506 726 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 ENSAO43768 121 aaKnown RBP10.15□□□□□ -0.78
HDAC3-204ENST00000469207 IGHV4-59P01825 116 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 HLA-DQA2P01906 255 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 GYPAP02724 150 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 GRPP07492 148 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4L2P0CJ85 424 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4L3P0CJ86 424 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4L4P0CJ87 422 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4L5P0CJ88 424 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4L6P0CJ89 424 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4L7P0CJ90 424 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 RHCEP18577 417 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DLX1P56177 255 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 OR8G1Q15617 311 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 ZNF362Q5T0B9 420 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-204ENST00000469207 SLC35F1Q5T1Q4 408 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 GLYATQ6IB77 296 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 ASPHD2Q6ICH7 369 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4L9Q6RFH8 374 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-204ENST00000469207 LNX2Q8N448 690 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 RNF148Q8N7C7 305 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 SDR9C7Q8NEX9 313 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 OR11L1Q8NGX0 322 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 OR2AJ1Q8NGZ0 328 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 OR4F5Q8NH21 305 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 LINC01006Q8NI28 216 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 WDFY2Q96P53 400 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 ATF6BQ99941 703 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 HOPXQ9BPY8 73 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-204ENST00000469207 KCTD14Q9BQ13 255 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-204ENST00000469207 NDEL1Q9GZM8 345 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 NSRP1Q9H0G5 558 aaKnown RBP10.15□□□□□ -0.78
HDAC3-204ENST00000469207 VIPAS39Q9H9C1 493 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 NOX4Q9NPH5 578 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 ERVK-18Q9QC07 812 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 RNF7Q9UBF6 113 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 DUX4Q9UBX2 424 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 CYB5R1Q9UHQ9 305 aa10.15□□□□□ -0.78
HDAC3-204ENST00000469207 FAM32AQ9Y421 112 aaKnown RBP10.15□□□□□ -0.78
HDAC3-204ENST00000469207 TVP23AA6NH52 213 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 LGALS8O00214 317 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 P2RY10O00398 339 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 RENP00797 406 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 PYCR1P32322 319 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 MALLQ13021 153 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 GLYATL3Q5SZD4 288 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 HIST2H2BDQ6DRA6 164 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 DNM1P34Q6PK57 102 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 MRPL21Q7Z2W9 205 aaKnown RBP10.14□□□□□ -0.79
HDAC3-204ENST00000469207 ARPINQ7Z6K5 226 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 ZBTB46Q86UZ6 589 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 C1QL4Q86Z23 238 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 CELF2-AS1Q8N7Q2 184 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 OR51L1Q8NGJ5 315 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 FANK1Q8TC84 345 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 ERGIC1Q969X5 290 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 SEH1LQ96EE3 360 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 FAM71F1Q96KD3 344 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-204ENST00000469207 IFT27Q9BW83 186 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 SIRPDQ9H106 197 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 SEMA6AQ9H2E6 1030 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 PPP1R3EQ9H7J1 279 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 EFCAB1Q9HAE3 211 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 ACOXLQ9NUZ1 547 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 DCAF13Q9NV06 445 aaKnown RBP10.14□□□□□ -0.79
HDAC3-204ENST00000469207 C1orf123Q9NWV4 160 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 DNAJB11Q9UBS4 358 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 AP3M1Q9Y2T2 418 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 RNF114Q9Y508 228 aa10.14□□□□□ -0.79
HDAC3-204ENST00000469207 IGHV1-69DA0A0B4J2H0 117 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 A0A1B0GUS0 222 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 GGT3PA6NGU5 568 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 M0R135 149 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 OR10H3O60404 316 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 NDUFA7O95182 113 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 IGHV1-69P01742 117 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 SLC2A1P11166 492 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 H2AFXP16104 143 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-204ENST00000469207 MSX2P35548 267 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-204ENST00000469207 NUDT2P50583 147 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 PRKXP51817 358 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 TPTEP56180 551 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 PSME3P61289 254 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 CD276Q5ZPR3 534 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 PGM2L1Q6PCE3 622 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 ZNF620Q6ZNG0 422 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 BTN2A1Q7KYR7 527 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 FAM90A1Q86YD7 464 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 GCSAMQ8N6F7 178 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 CYB561A3Q8NBI2 242 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms