RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SCGB1D1O95968 90 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TOMM40O96008 361 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 KNG1P01042 644 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 FGBP02675 491 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 RPN2P04844 631 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 BCHEP06276 602 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 DCNP07585 359 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 UMODP07911 640 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SFTPBP07988 381 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CHRM2P08172 466 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SOD3P08294 240 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 IL6RP08887 468 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SLC35G4P0C7Q5 338 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TRGC1P0CF51 173 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 MAKP20794 623 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 RPS4Y1P22090 263 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 AOAHP28039 575 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 BRS3P32247 399 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TAGLN2P37802 199 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 NSG1P42857 185 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 KHKP50053 298 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 POLR2HP52434 150 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ATP1B3P54709 279 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 FAM3BP58499 235 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TAS2R41P59536 307 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 UBE2KP61086 200 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 RAB11AP62491 216 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TRA2BP62995 288 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 PAFAH1B2P68402 229 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 HBA1P69905 142 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SIGLEC14Q08ET2 396 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CHIT1Q13231 466 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SMAD4Q13485 552 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 GGTLC2Q14390 218 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 MELKQ14680 651 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CSRP2Q16527 193 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 PSG3Q16557 428 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 C2orf68Q2NKX9 166 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CTXN3Q4LDR2 81 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 MORN2Q502X0 79 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 GPR157Q5UAW9 335 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 C1orf189Q5VU69 101 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SLC39A5Q6ZMH5 540 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF620Q6ZNG0 422 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 Q6ZRG5 221 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 MBOAT2Q6ZWT7 520 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OTOP2Q7RTS6 562 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 LINC01551Q86U37 167 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SCN4BQ8IWT1 228 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 IQCF1Q8N6M8 205 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 COX18Q8N8Q8 333 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF738Q8NE65 137 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SLC26A10Q8NG04 563 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OR10H4Q8NGA5 316 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OR56A1Q8NGH5 318 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OR52B4Q8NGK2 314 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OR6K2Q8NGY2 324 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OR1P1Q8NH06 330 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OR2V1Q8NHB1 315 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 MFSD8Q8NHS3 518 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CD300LFQ8TDQ1 290 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 GPX8Q8TED1 209 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SLC38A5Q8WUX1 472 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SECTM1Q8WVN6 248 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SMPDL3BQ92485 455 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ESAMQ96AP7 390 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A38Q96DW6 304 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 FBXO17Q96EF6 278 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CPNE2Q96FN4 548 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 NUDT11Q96G61 164 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF845Q96IR2 970 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 C4orf36Q96KX1 117 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 GAL3ST4Q96RP7 486 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 LPAR4Q99677 370 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CIPCQ9C0C6 399 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SLC5A7Q9GZV3 580 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ARV1Q9H2C2 271 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TCEAL2Q9H3H9 227 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 FBXO44Q9H4M3 255 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM231Q9H6L2 316 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 LPAR2Q9HBW0 351 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 USP36Q9P275 1121 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 OR5V1Q9UGF6 321 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ST6GALNAC2Q9UJ37 374 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 CDC42EP3Q9UKI2 254 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SH2B3Q9UQQ2 575 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF337Q9Y3M9 751 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 YIPF1Q9Y548 306 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TRAV30A0A087WSZ9 112 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 A0A0A6YYC8 382 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 PIGBOS1A0A0B4J2F0 54 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TRBV5-4A0A0C4DH59 114 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TRBV2A0A0J9YWF9 115 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ZC3H12DA2A288 527 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM235A6NFC5 223 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 GJE1A6NN92 205 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF705GA8MUZ8 300 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ANKRD66B4E2M5 251 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM238C9JI98 176 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 H3BNC9 293 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms