RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 LNX2Q8N448 690 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 ZDHHC22Q8N966 263 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 C19orf18Q8NEA5 215 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 OR8B3Q8NGG8 313 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 OR6K6Q8NGW6 343 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 OR4Q3Q8NH05 313 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 DVL3Q92997 716 aaPredicted RBP18.24■□□□□ 0.51
TTC28-204ENST00000468807 NEIL1Q96FI4 390 aaPredicted RBP18.24■□□□□ 0.51
TTC28-204ENST00000468807 PLEKHA8Q96JA3 519 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 OR8B2Q96RD0 313 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 DDOQ99489 341 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 MAGIXQ9H6Y5 334 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 VNN3Q9NY84 501 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 ZNF69Q9UC07 566 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 TMEM89A2RUT3 159 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 CD300LBA8K4G0 201 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 ENTPD1P49961 510 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 ZNF92Q03936 586 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 MICAQ29983 383 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 ZNF181Q2M3W8 571 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 ZNF404Q494X3 552 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 FAM98BQ52LJ0 330 aaKnown RBP18.23■□□□□ 0.51
TTC28-204ENST00000468807 ZNF362Q5T0B9 420 aaPredicted RBP18.23■□□□□ 0.51
TTC28-204ENST00000468807 OR2T5Q6IEZ7 315 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 LCN8Q6JVE9 175 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 SPATC1Q76KD6 591 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 ARHGAP24Q8N264 748 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 ZNF511Q8NB15 262 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 OR2T33Q8NG76 320 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 OR2T29Q8NH02 315 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 DUX5Q96PT3 197 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 CCT8L2Q96SF2 557 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 ADAT1Q9BUB4 502 aaKnown RBP18.23■□□□□ 0.51
TTC28-204ENST00000468807 MUC13Q9H3R2 512 aa18.23■□□□□ 0.51
TTC28-204ENST00000468807 IGHV3OR16-10A0A075B7F0 116 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 ZNF593O00488 134 aaPredicted RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 FAM20BO75063 409 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 CLUP10909 449 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 SLC2A1P11166 492 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 CD80P33681 288 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 CD200P41217 278 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 GATA4P43694 442 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 UBA52P62987 128 aaKnown RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 TRIM25Q14258 630 aaKnown RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 MPPED2Q15777 294 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 KLF17Q5JT82 389 aaPredicted RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 GLYATL3Q5SZD4 288 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 DRAM2Q6UX65 266 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 BCL6BQ8N143 479 aaPredicted RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 CELF2-AS1Q8N7Q2 184 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 BOLLQ8N9W6 283 aaKnown RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 OTULINQ96BN8 352 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 CCDC124Q96CT7 223 aaKnown RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 SLAMF6Q96DU3 332 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 LRGUKQ96M69 825 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 MS4A7Q9GZW8 240 aaPredicted RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 BAIAP2Q9UQB8 552 aa18.22■□□□□ 0.51
TTC28-204ENST00000468807 NOP16Q9Y3C1 178 aaKnown RBP18.22■□□□□ 0.51
TTC28-204ENST00000468807 A0A1B0GWJ7 208 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 RIIAD1A6NNX1 92 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 IFNGP01579 166 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 SPI1P17947 270 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 PITPNBP48739 271 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 COMPP49747 757 aaPredicted RBP18.21■□□□□ 0.51
TTC28-204ENST00000468807 MS4A2Q01362 244 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 LRRN1Q6UXK5 716 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 OR10G2Q8NGC3 310 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 ERGIC1Q969X5 290 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 SLC22A4Q9H015 551 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 MMADHCQ9H3L0 296 aaPredicted RBP18.21■□□□□ 0.51
TTC28-204ENST00000468807 FN3KRPQ9HA64 309 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 CLN8Q9UBY8 286 aa18.21■□□□□ 0.51
TTC28-204ENST00000468807 IGHV2-70DA0A0C4DH43 119 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 C5orf63A6NC05 138 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 TBX1O43435 398 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 CALB2P22676 271 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 ANOS1P23352 680 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 CPT2P23786 658 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 SLC25A1P53007 311 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 HOXA4Q00056 320 aaPredicted RBP18.2■□□□□ 0.5
TTC28-204ENST00000468807 PAX8Q06710 450 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 LYPD2Q6UXB3 125 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 PARP8Q8N3A8 854 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 TEX47Q8TBZ9 253 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 Q8TCH9 128 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 KCNJ15Q99712 375 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 DGCR6LQ9BY27 220 aa18.2■□□□□ 0.5
TTC28-204ENST00000468807 ZNF878C9JN71 531 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 H3BN98 237 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 GMDSO60547 372 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 IGHV4-38-2P0DP08 117 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 ZNF3P17036 446 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 OTX1P32242 354 aaPredicted RBP18.19■□□□□ 0.5
TTC28-204ENST00000468807 BAMBIQ13145 260 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 SFRP4Q6FHJ7 346 aaPredicted RBP18.19■□□□□ 0.5
TTC28-204ENST00000468807 DCDC5Q6ZRR9 648 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 DOK3Q7L591 496 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 CCDC197Q8NCU1 140 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 RAB40AQ8WXH6 277 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 TECTBQ96PL2 329 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms