RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RP2O75695 350 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 IGHV1-46P01743 117 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 HPXP02790 462 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 OR2T7P0C7T2 308 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 DBTP11182 482 aaKnown RBP9.4□□□□□ -0.9
MSH5-212ENST00000467319 GIFP27352 417 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 MAGEB1P43366 347 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 CXCR4P61073 352 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 ISL1P61371 349 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 EGR3Q06889 387 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 MALLQ13021 153 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 CDK5R2Q13319 367 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 IL18R1Q13478 541 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 TTC23Q5W5X9 447 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 OR2T2Q6IF00 324 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 KCTD18Q6PI47 426 aaPredicted RBP9.4□□□□□ -0.9
MSH5-212ENST00000467319 CLEC2AQ6UVW9 174 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 USP51Q70EK9 711 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 ZNF679Q8IYX0 411 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 ZNF283Q8N7M2 679 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 ZNF555Q8NEP9 628 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 OR2T27Q8NH04 317 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 OR2AE1Q8NHA4 323 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 FBLIM1Q8WUP2 373 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 CYGBQ8WWM9 190 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 RNFT2Q96EX2 444 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 APOL4Q9BPW4 351 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 SLC30A2Q9BRI3 323 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
MSH5-212ENST00000467319 TTTY10Q9BZA0 68 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 VCXQ9H320 206 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 MSL2Q9HCI7 577 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 ZNF319Q9P2F9 582 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 AASSQ9UDR5 926 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 MRM2Q9UI43 246 aaKnown RBP9.4□□□□□ -0.9
MSH5-212ENST00000467319 ZDHHC8Q9ULC8 765 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 hCG_38984A0A1B0GV85 526 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 ACOD1A6NK06 481 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 ZNF670-ZNF695F2Z2N8 137 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 NDUFS8O00217 210 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 CLIC3O95833 236 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 IGLV3-1P01715 115 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 IGHA1P01876 353 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 ANXA2P07355 339 aaKnown RBP9.39□□□□□ -0.91
MSH5-212ENST00000467319 GNAO1P09471 354 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 DAOP14920 347 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 SELEP16581 610 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 CAPGP40121 348 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 MMP16P51512 607 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 PRSS12P56730 875 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 ACTC1P68032 377 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 ACTA1P68133 377 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 ZNF85Q03923 595 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 MFGE8Q08431 387 aaPredicted RBP9.39□□□□□ -0.91
MSH5-212ENST00000467319 TNK1Q13470 666 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 RIN1Q13671 783 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 OR8B8Q15620 311 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 FAM57BQ71RH2 274 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 PGAP1Q75T13 922 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 MRPL21Q7Z2W9 205 aaKnown RBP9.39□□□□□ -0.91
MSH5-212ENST00000467319 KRT77Q7Z794 578 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 CIARTQ8N365 385 aaPredicted RBP9.39□□□□□ -0.91
MSH5-212ENST00000467319 ZNF786Q8N393 782 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 OR8G5Q8NG78 346 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 OR8B12Q8NGG6 310 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 FAM168AQ92567 244 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 LGALS12Q96DT0 336 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 Q96MT0 163 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 DIRC2Q96SL1 478 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 MROQ9BYG7 248 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 RGCCQ9H4X1 137 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 MOB1AQ9H8S9 216 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 SP140LQ9H930 580 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 MRPS18AQ9NVS2 196 aaKnown RBP9.39□□□□□ -0.91
MSH5-212ENST00000467319 NUFIP1Q9UHK0 495 aaKnown RBP9.39□□□□□ -0.91
MSH5-212ENST00000467319 EXOGQ9Y2C4 368 aaKnown RBP9.39□□□□□ -0.91
MSH5-212ENST00000467319 CR1P17927 2039 aa9.39□□□□□ -0.91
MSH5-212ENST00000467319 A0A0U1RQV5 110 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 LOC390937A0A1W2PQ73 354 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 SNTNA6NMZ2 147 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 CD300LBA8K4G0 201 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 H0YHG0 523 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 H7C1Q1 480 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 PSMD9O00233 223 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 MLNRO43193 412 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 SULT1C4O75897 302 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 PNPP00491 289 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 PDLIM4P50479 330 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 RIDAP52758 137 aaKnown RBP9.38□□□□□ -0.91
MSH5-212ENST00000467319 AQP4P55087 323 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 CCL8P80075 99 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 FAM3AP98173 230 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 SMN1Q16637 294 aaKnown RBP9.38□□□□□ -0.91
MSH5-212ENST00000467319 ZNF829Q3KNS6 432 aaPredicted RBP9.38□□□□□ -0.91
MSH5-212ENST00000467319 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.38□□□□□ -0.91
MSH5-212ENST00000467319 OR5AS1Q8N127 324 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 DHRSXQ8N5I4 330 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 BHLHE23Q8NDY6 225 aa9.38□□□□□ -0.91
MSH5-212ENST00000467319 SETD9Q8NE22 299 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms