RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 G6PC2Q9NQR9 355 aa13.06□□□□□ -0.32
NPHP4-205ENST00000466897 FAIMQ9NVQ4 179 aa13.06□□□□□ -0.32
NPHP4-205ENST00000466897 CMAHPQ9Y471 501 aa13.06□□□□□ -0.32
NPHP4-205ENST00000466897 DSCAMO60469 2012 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 IGLV3-1P01715 115 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 MT-ND2P03891 347 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 RPSAP08865 295 aaKnown RBP13.05□□□□□ -0.32
NPHP4-205ENST00000466897 SLC2A1P11166 492 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 RAC2P15153 192 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 TAS2R43P59537 309 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 BDH1Q02338 343 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 ACSM1Q08AH1 577 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 BCL2L15Q5TBC7 163 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 OR2G6Q5TZ20 316 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 C20orf204Q6ZNR8 217 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 FAM57BQ71RH2 274 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 TMEM200AQ86VY9 491 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 ELMOD2Q8IZ81 293 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 OR8B12Q8NGG6 310 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 OR2G2Q8NGZ5 317 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 SLC25A40Q8TBP6 338 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-205ENST00000466897 NEUROG1Q92886 237 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 PGAM5Q96HS1 289 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 REPIN1Q9BWE0 567 aaKnown RBP13.05□□□□□ -0.32
NPHP4-205ENST00000466897 OR2J1Q9GZK6 312 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 PBOV1Q9GZY1 135 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 ZNF696Q9H7X3 374 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 TRIM36Q9NQ86 728 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 BABAM2Q9NXR7 383 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 ZNF319Q9P2F9 582 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 FBXO9Q9UK97 447 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-205ENST00000466897 OR52A1Q9UKL2 312 aa13.05□□□□□ -0.32
NPHP4-205ENST00000466897 LSM2Q9Y333 95 aaKnown RBP13.05□□□□□ -0.32
NPHP4-205ENST00000466897 RPP14O95059 124 aaKnown RBP13.04□□□□□ -0.32
NPHP4-205ENST00000466897 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 TTRP02766 147 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 ISG15P05161 165 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 KITLGP21583 273 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 TTKP33981 857 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 ERVS71-1P61550 626 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 GLYATL3Q5SZD4 288 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 ZNF773Q6PK81 442 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 Q6ZSR3 168 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 DTX2Q86UW9 622 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 SVOPQ8N4V2 548 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 SYNPRQ8TBG9 265 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 HAVCR1Q96D42 359 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 CCDC90BQ9GZT6 254 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 OR51B6Q9H340 312 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 POFUT1Q9H488 388 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 CGGBP1Q9UFW8 167 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-205ENST00000466897 CELSR2Q9HCU4 2923 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 ROS1P08922 2347 aa13.04□□□□□ -0.32
NPHP4-205ENST00000466897 ARFGEF3Q5TH69 2177 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 LOC390937A0A1W2PQ73 354 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 TBX1O43435 398 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ATE1O95260 518 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 OR4A8P0C604 315 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 DANCRP0C864 163 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 UBCP0CG48 685 aaKnown RBP13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ATP6V1B1P15313 513 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 CCL1P22362 96 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ANOS1P23352 680 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 GCH1P30793 250 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 SERPINF1P36955 418 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 FABP6P51161 128 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 KLF3P57682 345 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-205ENST00000466897 SELENOVP59797 346 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 NANOS3P60323 173 aaKnown RBP13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ZNF92Q03936 586 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ALKBH1Q13686 389 aaKnown RBP13.03□□□□□ -0.32
NPHP4-205ENST00000466897 GK2Q14410 553 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-205ENST00000466897 SPHARQ15513 63 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 MOGQ16653 247 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 TIGD6Q17RP2 521 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 MSMPQ1L6U9 139 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 WDR38Q5JTN6 314 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 RPL22L1Q6P5R6 122 aaKnown RBP13.03□□□□□ -0.32
NPHP4-205ENST00000466897 VHLLQ6RSH7 139 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 PGAP1Q75T13 922 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 SPARTQ8N0X7 666 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 FBXL14Q8N1E6 418 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 MUC15Q8N387 334 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 PRSS35Q8N3Z0 413 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 CCDC54Q8NEL0 328 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 FCGR1BQ92637 280 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 SGK3Q96BR1 496 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 REEP6Q96HR9 211 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 PLK3Q9H4B4 646 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ISYNA1Q9NPH2 558 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 BRD7Q9NPI1 651 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ACOT13Q9NPJ3 140 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 FRRS1LQ9P0K9 344 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 ST6GALNAC2Q9UJ37 374 aa13.03□□□□□ -0.32
NPHP4-205ENST00000466897 hCG_38984A0A1B0GV85 526 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 C5orf63A6NC05 138 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 TMEM212A6NML5 194 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 OR4C45A6NMZ5 311 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms