RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CBR1P16152 277 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 POU3F3P20264 500 aaPredicted RBP7.89□□□□□ -1.15
HPS4-209ENST00000466781 PPP1CAP62136 330 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 ACKR1Q16570 336 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 ELFN2Q5R3F8 820 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 AVPI1Q5T686 147 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 AGBL4Q5VU57 503 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 TMEM81Q6P7N7 255 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 BTNL3Q6UXE8 466 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 EDARADDQ8WWZ3 215 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 DDOQ99489 341 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 GPR84Q9NQS5 396 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 PSENENQ9NZ42 101 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 LAMP3Q9UQV4 416 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 COL4A1P02462 1669 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 ZNF724A8MTY0 619 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 CCSO14618 274 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 RBP4P02753 201 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 ZXDAP98168 799 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 EGR3Q06889 387 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 SLC51BQ86UW2 128 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 ARHGEF39Q8N4T4 335 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 OR11G2Q8NGC1 345 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 OR51S1Q8NGJ8 323 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 AAMDCQ9H7C9 122 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 OR2M5A3KFT3 312 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 K7EQS6 105 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 AMTP48728 403 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 WDR31Q8NA23 367 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 GPR32P1Q8NGA4 272 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 GALMQ96C23 342 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 SDF2Q99470 211 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 PBOV1Q9GZY1 135 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 AMMECR1Q9Y4X0 333 aaPredicted RBP7.89□□□□□ -1.15
HPS4-209ENST00000466781 FER1L6Q2WGJ9 1857 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 TRAV17A0A0B4J275 112 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 OR6C68A6NDL8 312 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 FGF17O60258 216 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 ST6GAL1P15907 406 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 BTG2P78543 158 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 ZNF816Q0VGE8 651 aaPredicted RBP7.89□□□□□ -1.15
HPS4-209ENST00000466781 BTN1A1Q13410 526 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 OR2Z1Q8NG97 314 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 CSAG2Q9Y5P2 127 aa7.89□□□□□ -1.15
HPS4-209ENST00000466781 POM121BA6NF01 834 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 STUMQ69YW2 141 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 TMUB2Q71RG4 321 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 SLC36A1Q7Z2H8 476 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 NKAIN4Q8IVV8 208 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 LRFN3Q9BTN0 628 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 ADAT1Q9BUB4 502 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 MKRN2Q9H000 416 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 WSB2Q9NYS7 404 aaPredicted RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 R4GMQ9 66 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 EVPLQ92817 2033 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 TAAR5O14804 337 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 FBP1P09467 338 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 B4GALT1P15291 398 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 S100A11P31949 105 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 RAB1AP62820 205 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 DUSP8Q13202 625 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 TMPRSS11FQ6ZWK6 438 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 CCDC71Q8IV32 467 aaPredicted RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 KCNRGQ8N5I3 272 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 NOXO1Q8NFA2 376 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 GNPNAT1Q96EK6 184 aaPredicted RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 RYDENQ9NUL5 291 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 ANKUB1A6NFN9 424 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 ATP6V1G2-DDX39BF2Z307 99 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 NME2P1O60361 137 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 B4GALT3O60512 393 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 CTSLP07711 333 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 HIST1H1CP16403 213 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 FGF7P21781 194 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 MMP11P24347 488 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 HOXC8P31273 242 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 CASP3P42574 277 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 RPL34P49207 117 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 CCR9P51686 369 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 HFEQ30201 348 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 SPATA46Q5T0L3 261 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 NECAP1Q8NC96 275 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 ZNF707Q96C28 371 aaPredicted RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 GRAMD2BQ96HH9 432 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 PLA2G12AQ9BZM1 189 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 FBXL4Q9UKA2 621 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 YTHDF2Q9Y5A9 579 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 ZC3H12DA2A288 527 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 FITM1A5D6W6 292 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 B3GALNT1O75752 331 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 SPI1P17947 270 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 MEOX1P50221 254 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 PNLIPRP2P54317 469 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 PRSS36Q5K4E3 855 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 TMEM268Q5VZI3 342 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 PRSS45Q7RTY3 260 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 ZFP62Q8NB50 900 aaPredicted RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 CCL4L1Q8NHW4 92 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 SEC22CQ9BRL7 303 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms