RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 PPIAL4EA0A075B759 164 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 PPIAL4CA0A0B4J2A2 164 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 CD300LBA8K4G0 201 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 FAM157AC9JC47 383 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 PPIAL4DF5H284 164 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 PPIAL4FP0DN26 164 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 RPS27P42677 84 aaKnown RBP13.74□□□□□ -0.21
SSNA1-204ENST00000464553 ERFP50548 548 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 MZT1Q08AG7 82 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 PTGES3Q15185 160 aaKnown RBP13.74□□□□□ -0.21
SSNA1-204ENST00000464553 SNCBQ16143 134 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 SNAPC1Q16533 368 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 AVPI1Q5T686 147 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 ERI1Q8IV48 349 aaKnown RBP13.74□□□□□ -0.21
SSNA1-204ENST00000464553 C1orf87Q8N0U7 546 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 OR5AS1Q8N127 324 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 MUC20Q8N307 709 aaPredicted RBP13.74□□□□□ -0.21
SSNA1-204ENST00000464553 SPICQ8N5J4 248 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 OR6N2Q8NGY6 317 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 OTOSQ8NHW6 89 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 CENPNQ96H22 339 aaPredicted RBP13.74□□□□□ -0.21
SSNA1-204ENST00000464553 MEGF10Q96KG7 1140 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 GABARAPL1Q9H0R8 117 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 NARFLQ9H6Q4 476 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 MED20Q9H944 212 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 HIF1ANQ9NWT6 349 aa13.74□□□□□ -0.21
SSNA1-204ENST00000464553 MRPL15Q9P015 296 aaKnown RBP13.74□□□□□ -0.21
SSNA1-204ENST00000464553 SONP18583 2426 aaKnown RBP13.74□□□□□ -0.21
SSNA1-204ENST00000464553 KIAA1324LA8MWY0 1029 aaPredicted RBP13.73□□□□□ -0.21
SSNA1-204ENST00000464553 TMEM178BH3BS89 294 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 J3QLI3 93 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 IGHV2-70P01814 119 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 HSD11B1P28845 292 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 MDH2P40926 338 aaKnown RBP13.73□□□□□ -0.21
SSNA1-204ENST00000464553 PRKXP51817 358 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 RAD23AP54725 363 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 SCGB2A2Q13296 93 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 KDM4DQ6B0I6 523 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 DEGS2Q6QHC5 323 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 CXXC5Q7LFL8 322 aaKnown RBP13.73□□□□□ -0.21
SSNA1-204ENST00000464553 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.73□□□□□ -0.21
SSNA1-204ENST00000464553 KLHL36Q8N4N3 616 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 TEAD3Q99594 435 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 GAL3ST1Q99999 423 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 YIPF3Q9GZM5 350 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 KRT84Q9NSB2 600 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 TVP23BQ9NYZ1 205 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 ZNF391Q9UJN7 358 aa13.73□□□□□ -0.21
SSNA1-204ENST00000464553 POLR3KQ9Y2Y1 108 aaPredicted RBP13.73□□□□□ -0.21
SSNA1-204ENST00000464553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.73□□□□□ -0.21
SSNA1-204ENST00000464553 GGT3PA6NGU5 568 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 ACOD1A6NK06 481 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 MLNRO43193 412 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 PTBP3O95758 552 aaKnown RBP13.72□□□□□ -0.21
SSNA1-204ENST00000464553 LYNP07948 512 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 SBK2P0C263 348 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 PSKH1P11801 424 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 SLC2A5P22732 501 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 OPRL1P41146 370 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 CD200P41217 278 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 BTG1P62324 171 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 EFNB1P98172 346 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 ZNF92Q03936 586 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 SNAI3Q3KNW1 292 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 SPRNQ5BIV9 151 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 CCDC121Q6ZUS5 278 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 SLC16A9Q7RTY1 509 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 Q8TCH9 128 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 ZMYND19Q96E35 227 aaPredicted RBP13.72□□□□□ -0.21
SSNA1-204ENST00000464553 SIGLEC11Q96RL6 698 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 PCDHB10Q9UN67 800 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 TMEM14AQ9Y6G1 99 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 JMJD1CQ15652 2540 aa13.72□□□□□ -0.21
SSNA1-204ENST00000464553 MALRD1Q5VYJ5 2156 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 A0A0G2JMP0 313 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 A0A0X1KG70 313 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 PLPP2O43688 288 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 FOXH1O75593 365 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 H2BFMP0C1H6 154 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 ALOX5APP20292 161 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 DCTDP32321 178 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 CX3CR1P49238 355 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 MMP16P51512 607 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 KLHL12Q53G59 568 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 GLYATL3Q5SZD4 288 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 LCN1P1Q5VSP4 162 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 SLX4IPQ5VYV7 408 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 TMEM236Q5W0B7 351 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 ZFP1Q6P2D0 407 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 KCTD18Q6PI47 426 aaPredicted RBP13.71□□□□□ -0.21
SSNA1-204ENST00000464553 PRSS45Q7RTY3 260 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 BHLHE23Q8NDY6 225 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 OR4M2Q8NGB6 313 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 THEM6Q8WUY1 208 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 MNTQ99583 582 aa13.71□□□□□ -0.21
SSNA1-204ENST00000464553 PATZ1Q9HBE1 687 aaKnown RBP13.71□□□□□ -0.21
SSNA1-204ENST00000464553 H2AFY2Q9P0M6 372 aaPredicted RBP13.71□□□□□ -0.21
SSNA1-204ENST00000464553 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms