RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MRPL21Q7Z2W9 205 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF679Q8IYX0 411 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 CIARTQ8N365 385 aaPredicted RBP12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF786Q8N393 782 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 OR52H1Q8NGJ2 320 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 OR2T27Q8NH04 317 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 C10orf105Q8TEF2 133 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 Q96MT0 163 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 OR8B4Q96RC9 309 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 APOL4Q9BPW4 351 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 RNPEPL1Q9HAU8 725 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 BRD7Q9NPI1 651 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 DLL4Q9NR61 685 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 DECR2Q9NUI1 292 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 IQCF6A8MYZ5 107 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 PRR32B1ATL7 298 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 RNF223E7ERA6 249 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 NDUFS8O00217 210 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 TPD52L2O43399 206 aaKnown RBP12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 XRCC2O43543 280 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 NCR1O76036 304 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 APOL3O95236 402 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 ADH4P08319 380 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 FOSL1P15407 271 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 COL8A2P25067 703 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 PRSS12P56730 875 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 EGR3Q06889 387 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 Q6ZR03 302 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF771Q7L3S4 317 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 DHRSXQ8N5I4 330 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 RFLNBQ8N5W9 214 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 BHLHE23Q8NDY6 225 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 OR8G5Q8NG78 346 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 OR10H4Q8NGA5 316 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 OR13G1Q8NGZ3 307 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 CYGBQ8WWM9 190 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 RDH5Q92781 318 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 SGK3Q96BR1 496 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 RNFT2Q96EX2 444 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 PGAM5Q96HS1 289 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 C18orf12Q96KH6 178 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 TBX5Q99593 518 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 REG4Q9BYZ8 158 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 TTTY10Q9BZA0 68 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 OR10A2Q9H208 303 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 VCXQ9H320 206 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 IKZF2Q9UKS7 526 aa12.35□□□□□ -0.43
SQSTM1-205ENST00000464493 A0A1W2PQL4 384 aaPredicted RBP12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 LYNX1G3V0Z9 82 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 CLIC3O95833 236 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 LYNX1P0DP58 116 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 SLC25A16P16260 332 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 TNFSF4P23510 183 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 DCTDP32321 178 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 RIDAP52758 137 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 PSMA6P60900 246 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 ADARB1P78563 741 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 MRPS11P82912 194 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 TIGD6Q17RP2 521 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF691Q5VV52 312 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF540Q8NDQ6 660 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 OR2Z1Q8NG97 314 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 SPRYD4Q8WW59 207 aaPredicted RBP12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 SPSB4Q96A44 273 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 REEP6Q96HR9 211 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 SLC30A2Q9BRI3 323 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 EGLN1Q9GZT9 426 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 OPA3Q9H6K4 179 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 SAP30LQ9HAJ7 183 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 TMEM100Q9NV29 134 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF319Q9P2F9 582 aa12.34□□□□□ -0.43
SQSTM1-205ENST00000464493 TMEM269A0A1B0GVZ9 245 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 GGT3PA6NGU5 568 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 ACOD1A6NK06 481 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 CD300LBA8K4G0 201 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 SMAD7O15105 426 aaKnown RBP12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 MAGEB4O15481 346 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 LILRA1O75019 489 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 CD55P08174 381 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 INHBBP09529 407 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 CFL1P23528 166 aaKnown RBP12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 CRYBB2P43320 205 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 TNFAIP6P98066 277 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 IL5RAQ01344 420 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 SSX6Q7RTT6 188 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 LURAP1LQ8IV03 231 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 APH1BQ8WW43 257 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 YIPF5Q969M3 257 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 ELMOD3Q96FG2 381 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 COX4I2Q96KJ9 171 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 ADI1Q9BV57 179 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 RGCCQ9H4X1 137 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 CHODLQ9H9P2 273 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 PCDHGB1Q9Y5G3 927 aa12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 TEP1Q99973 2627 aaKnown RBP12.33□□□□□ -0.44
SQSTM1-205ENST00000464493 IGHV1-69-2A0A0G2JMI3 117 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms