RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 LINC00052Q96N35 136 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 C12orf57Q99622 126 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 PRSS27Q9BQR3 290 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 MAGT1Q9H0U3 335 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CA10Q9NS85 328 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 GDF2Q9UK05 429 aaPredicted RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 B3GALT5Q9Y2C3 310 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 YBX2Q9Y2T7 364 aaKnown RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 R4GMQ9 66 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 HEATR5BQ9P2D3 2071 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 TRAV20A0A0B4J274 112 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CD300LBA8K4G0 201 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 MCRIP1C9JLW8 97 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 IGF2P01344 180 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CHRM2P08172 466 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CD96P40200 585 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 UBE2NP61088 152 aaKnown RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 FZD2Q14332 565 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CNN3Q15417 329 aaKnown RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 SOHLH1Q5JUK2 328 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 SHEQ5VZ18 495 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 SSX9Q7RTT3 188 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CDH26Q8IXH8 852 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 BAP18Q8IXM2 172 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 SLC43A2Q8N370 569 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 ZSCAN4Q8NAM6 433 aaPredicted RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 LIPHQ8WWY8 451 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 FRZBQ92765 325 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 FBXW5Q969U6 566 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 SPIN2AQ99865 258 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 SPIN2BQ9BPZ2 258 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 FAM212BQ9NTI7 297 aaPredicted RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 A0A096LPE4 126 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 ADAP1O75689 374 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 Q5BKY6 102 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 RPS19BP1Q86WX3 136 aaKnown RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 GJC3Q8NFK1 279 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 OR52N4Q8NGI2 321 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 OR4D10Q8NGI6 311 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 ALKBH3Q96Q83 286 aaPredicted RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 DSPPQ9NZW4 1301 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 TMEM272A0A1B0GTI8 110 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 TTLL8A6PVC2 850 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 K7EQS6 105 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 CFDP00746 253 aaPredicted RBP8.15□□□□□ -1.1
HPS4-208ENST00000464362 CNR1P21554 472 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 DUSP3P51452 185 aaPredicted RBP8.15□□□□□ -1.1
HPS4-208ENST00000464362 RNF4P78317 190 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 HYAL1Q12794 435 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 ECH1Q13011 328 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 PLA1AQ53H76 456 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 EMC4Q5J8M3 183 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 GALNT16Q8N428 558 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 AGBL5Q8NDL9 886 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 TMPRSS13Q9BYE2 586 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 NMNAT2Q9BZQ4 307 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 ZCCHC4Q9H5U6 513 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 FAM96BQ9Y3D0 163 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 TMEM184BQ9Y519 407 aaPredicted RBP8.15□□□□□ -1.1
HPS4-208ENST00000464362 H0YIG0 161 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 TRAPPC2LH3BP13 241 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 H3BP45 60 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 M0R135 149 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 CYR61O00622 381 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 OR2F2O95006 317 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 SLC34A2O95436 690 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 FOLR1P15328 257 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 SLC35A1P78382 337 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 OR2F1Q13607 317 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 Q6ZRG5 221 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 PRSS42Q7Z5A4 293 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 CNEP1R1Q8N9A8 125 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 PSMF1Q92530 271 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 ZNF799Q96GE5 643 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 GNRHR2Q96P88 292 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 CCNL2Q96S94 520 aaPredicted RBP8.15□□□□□ -1.1
HPS4-208ENST00000464362 VN1R1Q9GZP7 353 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 S1PR5Q9H228 398 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 PIGMQ9H3S5 423 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 KCNE5Q9UJ90 142 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 PCDHB10Q9UN67 800 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 CHD5Q8TDI0 1954 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 SHANK1Q9Y566 2161 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 WDR87Q6ZQQ6 2873 aa8.15□□□□□ -1.1
HPS4-208ENST00000464362 GJE1A6NN92 205 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 C2CD4DB7Z1M9 353 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 TO15178 435 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 SPRY1O43609 319 aaPredicted RBP8.15□□□□□ -1.11
HPS4-208ENST00000464362 TXNDC12O95881 172 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 IGKV1D-16P01601 117 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 PATE4P0C8F1 98 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 AGFG1P52594 562 aaKnown RBP8.15□□□□□ -1.11
HPS4-208ENST00000464362 CARD18P57730 90 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 UBE2KP61086 200 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 C21orf62-AS1Q17RA5 79 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 MESTQ5EB52 335 aa8.15□□□□□ -1.11
HPS4-208ENST00000464362 FIP1L1Q6UN15 594 aaKnown RBP8.15□□□□□ -1.11
HPS4-208ENST00000464362 CLEC9AQ6UXN8 241 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms