RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 MRGPRX4Q96LA9 322 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 ABHD6Q9BV23 337 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 COL25A1Q9BXS0 654 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-204ENST00000461897 KCNK15Q9H427 330 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 TMEM138Q9NPI0 162 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 R4GMQ9 66 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 DOCK10Q96BY6 2186 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 NPIPB13A6NJU9 1138 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 NPIPB4C9JG80 1138 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 STMND1H3BQB6 276 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 PLPP3O14495 311 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 SLC16A7O60669 478 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 AHSA1O95433 338 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 SLC25A4P12235 298 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 CTLA4P16410 223 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 CTRB1P17538 263 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 CRABP1P29762 137 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 OC90Q02509 493 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-204ENST00000461897 ODF4Q2M2E3 257 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 ATPAF1Q5TC12 328 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-204ENST00000461897 CTRB2Q6GPI1 263 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DEGS2Q6QHC5 323 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 SLC35D2Q76EJ3 337 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 NKAIN3Q8N8D7 197 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 PLPP7Q8NBV4 271 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 ADAMTS17Q8TE56 1095 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DMRTA2Q96SC8 542 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 PRRX2Q99811 253 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 C1QTNF6Q9BXI9 259 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 ANGPTL4Q9BY76 406 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 HPF1Q9NWY4 346 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 HHLA2Q9UM44 414 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 LRP12Q9Y561 859 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 A0A1B0GW55 424 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 C11orf98E9PRG8 122 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF208O43345 1280 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 HLA-DQA2P01906 255 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 SERPINA7P05543 415 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 SPARCP09486 303 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DUX4L2P0CJ85 424 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DUX4L3P0CJ86 424 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DUX4L4P0CJ87 422 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DUX4L5P0CJ88 424 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DUX4L6P0CJ89 424 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DUX4L7P0CJ90 424 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 UBE2MP61081 183 aaKnown RBP11.04□□□□□ -0.64
COL4A6-204ENST00000461897 FOXK1P85037 733 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 SORDQ00796 357 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 MEF2DQ14814 521 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 GLYATL3Q5SZD4 288 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 MDGA2Q7Z553 956 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 GALNT16Q8N428 558 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 KCNRGQ8N5I3 272 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 ST8SIA4Q92187 359 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 PSMF1Q92530 271 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DVL3Q92997 716 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-204ENST00000461897 FOXRED1Q96CU9 486 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-204ENST00000461897 B3GNT4Q9C0J1 378 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 G6PC2Q9NQR9 355 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 RASL12Q9NYN1 266 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 TAS2R4Q9NYW5 299 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 DUX4Q9UBX2 424 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 IL17BQ9UHF5 180 aa11.04□□□□□ -0.64
COL4A6-204ENST00000461897 MEIS3P1A6NDR6 274 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 G3V3Y1 287 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 OR2T1O43869 369 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 OR6A2O95222 327 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 WDPCPO95876 746 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 ADAM8P78325 824 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 GABREP78334 506 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 GLO1Q04760 184 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 PMPCAQ10713 525 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 ZP4Q12836 540 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 EIF2B1Q14232 305 aaKnown RBP11.03□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF273Q14593 569 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 ACER2Q5QJU3 275 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 RAB12Q6IQ22 244 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 OR4K17Q8NGC6 315 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 OR13C8Q8NGS7 320 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 AQP3Q92482 292 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 PPP1R14AQ96A00 147 aa11.03□□□□□ -0.64
COL4A6-204ENST00000461897 SLC25A44Q96H78 314 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-204ENST00000461897 OR14I1A6ND48 311 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 A6NIZ1 184 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF736B4DX44 427 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-204ENST00000461897 H3BML4 177 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 OR2F2O95006 317 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 CYB5AP00167 134 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 PLGP00747 810 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-204ENST00000461897 IL2RAP01589 272 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 AMY2AP04746 511 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 RAP1BP61224 184 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 RAP1AP62834 184 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 DHRS2Q13268 280 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 OR2F1Q13607 317 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 C11orf88Q6PI97 169 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF704Q6ZNC4 412 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-204ENST00000461897 MOB3CQ70IA8 216 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-204ENST00000461897 OR8S1Q8NH09 359 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms