RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 FGD3Q5JSP0 725 aa18.15■□□□□ 0.5
HMG20B-207ENST00000461099 LINC00346Q8IVM7 164 aa18.15■□□□□ 0.5
HMG20B-207ENST00000461099 BOLLQ8N9W6 283 aaKnown RBP18.15■□□□□ 0.5
HMG20B-207ENST00000461099 LHX4Q969G2 390 aa18.15■□□□□ 0.5
HMG20B-207ENST00000461099 ATF6BQ99941 703 aa18.15■□□□□ 0.5
HMG20B-207ENST00000461099 SLC22A4Q9H015 551 aa18.15■□□□□ 0.5
HMG20B-207ENST00000461099 SIRPDQ9H106 197 aa18.15■□□□□ 0.5
HMG20B-207ENST00000461099 TRIM36Q9NQ86 728 aa18.15■□□□□ 0.5
HMG20B-207ENST00000461099 TRAV38-1A0A0B4J264 116 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 UNC119BA6NIH7 251 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 C3orf80F5H4A9 247 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 NDUFA2O43678 99 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 PTBP3O95758 552 aaKnown RBP18.14■□□□□ 0.49
HMG20B-207ENST00000461099 IGHV4-59P01825 116 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 SF3A3Q12874 501 aaKnown RBP eCLIP18.14■□□□□ 0.49
HMG20B-207ENST00000461099 TRAP1Q12931 704 aaKnown RBP18.14■□□□□ 0.49
HMG20B-207ENST00000461099 OR8B8Q15620 311 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 SMARCD3Q6STE5 483 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 MRPL21Q7Z2W9 205 aaKnown RBP18.14■□□□□ 0.49
HMG20B-207ENST00000461099 PLPP7Q8NBV4 271 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 OR2AJ1Q8NGZ0 328 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 ERMAPQ96PL5 475 aaPredicted RBP18.14■□□□□ 0.49
HMG20B-207ENST00000461099 RASSF4Q9H2L5 321 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 SMURF1Q9HCE7 757 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 AURKCQ9UQB9 309 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 FAM32AQ9Y421 112 aaKnown RBP18.14■□□□□ 0.49
HMG20B-207ENST00000461099 CAPN7Q9Y6W3 813 aa18.14■□□□□ 0.49
HMG20B-207ENST00000461099 CD300LBA8K4G0 201 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 GMDSO60547 372 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 IER3P46695 156 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 DBPQ10586 325 aaPredicted RBP18.13■□□□□ 0.49
HMG20B-207ENST00000461099 SLC36A3Q495N2 470 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 LDLRAD3Q86YD5 345 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 NMNAT3Q96T66 252 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 TCF7L1Q9HCS4 588 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 KRCC1Q9NPI7 259 aaPredicted RBP18.13■□□□□ 0.49
HMG20B-207ENST00000461099 PNRC2Q9NPJ4 139 aaKnown RBP18.13■□□□□ 0.49
HMG20B-207ENST00000461099 NDUFAF4Q9P032 175 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 CYB5R1Q9UHQ9 305 aa18.13■□□□□ 0.49
HMG20B-207ENST00000461099 TRBV4-1A0A0J9YWV2 114 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 A0A0U1RQK1 487 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 OOEPA6NGQ2 149 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 SLC22A31A6NKX4 558 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 NME4O00746 187 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 RENP00797 406 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 TPTEP56180 551 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 ARF6P62330 175 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 SEC23BQ15437 767 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 SCCPDHQ8NBX0 429 aa18.12■□□□□ 0.49
HMG20B-207ENST00000461099 ADAT1Q9BUB4 502 aaKnown RBP18.12■□□□□ 0.49
HMG20B-207ENST00000461099 ECDO95905 644 aaPredicted RBP18.11■□□□□ 0.49
HMG20B-207ENST00000461099 GYPAP02724 150 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 RHCEP18577 417 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 GGT2P36268 569 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 C11orf91Q3C1V1 193 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 BTN2A1Q7KYR7 527 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 ZBTB46Q86UZ6 589 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 ZSCAN4Q8NAM6 433 aaPredicted RBP18.11■□□□□ 0.49
HMG20B-207ENST00000461099 FAM162AQ96A26 154 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 DPAGT1Q9H3H5 408 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 RPRD1BQ9NQG5 326 aaKnown RBP18.11■□□□□ 0.49
HMG20B-207ENST00000461099 FGFR1OP2Q9NVK5 253 aa18.11■□□□□ 0.49
HMG20B-207ENST00000461099 M0R135 149 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 ARPC3O15145 178 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 SLC22A2O15244 555 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 FCN3O75636 299 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 TSPAN15O95858 294 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 HLA-DQA2P01906 255 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 HIST1H1CP16403 213 aaKnown RBP18.1■□□□□ 0.49
HMG20B-207ENST00000461099 GSK3BP49841 420 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 SLC7A2P52569 658 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 ZNF92Q03936 586 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 RFX4Q33E94 735 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 CGB2Q6NT52 195 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 GDPGP1Q6ZNW5 385 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 OR4K13Q8NH42 304 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 RP9Q8TA86 221 aaKnown RBP18.1■□□□□ 0.49
HMG20B-207ENST00000461099 SPTSSAQ969W0 71 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 ZNF799Q96GE5 643 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 HOPXQ9BPY8 73 aaPredicted RBP18.1■□□□□ 0.49
HMG20B-207ENST00000461099 CNTD2Q9H8S5 307 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 C1orf123Q9NWV4 160 aa18.1■□□□□ 0.49
HMG20B-207ENST00000461099 DVL1O14640 695 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 OR10H3O60404 316 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 GRPP07492 148 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 NCK1P16333 377 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 SLC6A6P31641 620 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 SNAI3Q3KNW1 292 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 Q6ZSV7 163 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 HDXQ7Z353 690 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 FAM90A1Q86YD7 464 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 C1QL4Q86Z23 238 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 PDZD9Q8IXQ8 264 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 PIP4P2Q8N4L2 257 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 SPERTQ8NA61 448 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 OR52J3Q8NH60 311 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 FANK1Q8TC84 345 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 MAP6Q96JE9 813 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 C7orf34Q96L11 122 aa18.09■□□□□ 0.49
HMG20B-207ENST00000461099 FUZQ9BT04 418 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms