RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 KCTD18Q6PI47 426 aaPredicted RBP17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 DEGS2Q6QHC5 323 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 USP51Q70EK9 711 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 PGAP1Q75T13 922 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 OR5AS1Q8N127 324 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 OR8G5Q8NG78 346 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 RHOXF1Q8NHV9 184 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 ASB17Q8WXJ9 295 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 RDH5Q92781 318 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 RFKQ969G6 155 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 YIPF5Q969M3 257 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 SPSB4Q96A44 273 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 OR8B4Q96RC9 309 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 MNTQ99583 582 aa17.52■□□□□ 0.4
RPUSD3-210ENST00000460909 RP2O75695 350 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 CXCR4P61073 352 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 POU4F2Q12837 409 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 RIN1Q13671 783 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 MEDAGQ5VYS4 303 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 KRT77Q7Z794 578 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF679Q8IYX0 411 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 DIRC2Q96SL1 478 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 SMR3AQ99954 134 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 SLC30A2Q9BRI3 323 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 NIPAL2Q9H841 368 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 N6AMT1Q9Y5N5 214 aa17.51■□□□□ 0.39
RPUSD3-210ENST00000460909 YLPM1P49750 1951 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 PSMD9O00233 223 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 SMAD7O15105 426 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 XRCC2O43543 280 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF254O75437 659 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 ANXA2P07355 339 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 SELEP16581 610 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 DCTDP32321 178 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 CRYBB2P43320 205 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 NR4A2P43354 598 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 PSMA6P60900 246 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 CARTPTQ16568 116 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF322Q6U7Q0 402 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 FAM57BQ71RH2 274 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 MRPL21Q7Z2W9 205 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 MAPK1IP1LQ8NDC0 245 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 SGK3Q96BR1 496 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 PIMREGQ9BSJ6 248 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 TTTY10Q9BZA0 68 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 SP140LQ9H930 580 aa17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.5■□□□□ 0.39
RPUSD3-210ENST00000460909 APOL3O95236 402 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 ACHEP22303 614 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 LOXL1Q08397 574 aaPredicted RBP17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 SSX6Q7RTT6 188 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 BHLHE23Q8NDY6 225 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 OR2Z1Q8NG97 314 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 OR52H1Q8NGJ2 320 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 OR13G1Q8NGZ3 307 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 MROQ9BYG7 248 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 BPESC1Q9GZL8 116 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 GSX1Q9H4S2 264 aaPredicted RBP17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 SAP30LQ9HAJ7 183 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 DECR2Q9NUI1 292 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 TANC2Q9HCD6 1990 aa17.49■□□□□ 0.39
RPUSD3-210ENST00000460909 CSPG4Q6UVK1 2322 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 CD300LBA8K4G0 201 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF670-ZNF695F2Z2N8 137 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 J3QRE1 110 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 PHYHO14832 338 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 MAGEB4O15481 346 aaPredicted RBP17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 MLNRO43193 412 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 TBX1O43435 398 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 MPZL2O60487 215 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 OR2T7P0C7T2 308 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 MTNR1AP48039 350 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 ADARB1P78563 741 aaKnown RBP17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 TNFAIP6P98066 277 aaPredicted RBP17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 SLC34A1Q06495 639 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 EGR3Q06889 387 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 BIVMQ86UB2 503 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 OR2T27Q8NH04 317 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 APH1BQ8WW43 257 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 ELMOD3Q96FG2 381 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 APOL4Q9BPW4 351 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 OPA3Q9H6K4 179 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 CHODLQ9H9P2 273 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 BRD7Q9NPI1 651 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF275Q9NSD4 429 aaPredicted RBP17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 FAM206AQ9NX38 181 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 CACNG2Q9Y698 323 aa17.48■□□□□ 0.39
RPUSD3-210ENST00000460909 TLN2Q9Y4G6 2542 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 IGHV1-69-2A0A0G2JMI3 117 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 A0A1W2PQL4 384 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 H0YL77 283 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 CDC14BO60729 498 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 SRSF10O75494 262 aaKnown RBP17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 FAM3AP98173 230 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 KRTAP1-1Q07627 177 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF684Q5T5D7 378 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF691Q5VV52 312 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF540Q8NDQ6 660 aa17.47■□□□□ 0.39
RPUSD3-210ENST00000460909 ZNF555Q8NEP9 628 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms