RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 BTG1P62324 171 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 ATP6AP1Q15904 470 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 TMEM155Q4W5P6 130 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 KLHL12Q53G59 568 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 SLC35D3Q5M8T2 416 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 FAHD1Q6P587 224 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 SPATC1Q76KD6 591 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 LRRC28Q86X40 367 aaPredicted RBP19.39■□□□□ 0.69
PTPN4-208ENST00000460289 CPOQ8IVL8 374 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 TIGD4Q8IY51 512 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 PARP8Q8N3A8 854 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 KLHL36Q8N4N3 616 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 RNF133Q8WVZ7 376 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 ABHD6Q9BV23 337 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 DCAF16Q9NXF7 216 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 DYSFO75923 2080 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 GGT3PA6NGU5 568 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 LRRC30A6NM36 301 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 CD300LBA8K4G0 201 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 F5H5P2 479 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 TMEM178BH3BS89 294 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 XRCC2O43543 280 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 HLA-DPB1P04440 258 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 DAPP51397 102 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 ZNF92Q03936 586 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 SNAPC1Q16533 368 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 TMEM236Q5W0B7 351 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 FAHD2BQ6P2I3 314 aaPredicted RBP19.38■□□□□ 0.69
PTPN4-208ENST00000460289 CELF2-AS1Q8N7Q2 184 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 ZNF454Q8N9F8 522 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 ZMYND19Q96E35 227 aaPredicted RBP19.38■□□□□ 0.69
PTPN4-208ENST00000460289 DUS3LQ96G46 650 aaKnown RBP19.38■□□□□ 0.69
PTPN4-208ENST00000460289 FAHD2AQ96GK7 314 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 SIGLEC11Q96RL6 698 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 TANC2Q9HCD6 1990 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 N6AMT1Q9Y5N5 214 aa19.38■□□□□ 0.69
PTPN4-208ENST00000460289 G3V2T6 193 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 GMDSO60547 372 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 CIB2O75838 187 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 PNPP00491 289 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 FCGR1AP12314 374 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 CX3CR1P49238 355 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 MMP16P51512 607 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 PRSS12P56730 875 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 ESRRGP62508 458 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 ZNF181Q2M3W8 571 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 GLYATL3Q5SZD4 288 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 MUC20Q8N307 709 aaPredicted RBP19.37■□□□□ 0.69
PTPN4-208ENST00000460289 TEX29Q8N6K0 151 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 OR2AE1Q8NHA4 323 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 ERGIC1Q969X5 290 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 TVP23BQ9NYZ1 205 aa19.37■□□□□ 0.69
PTPN4-208ENST00000460289 FBN1P35555 2871 aaKnown RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 A0A0G2JMP0 313 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 A0A0X1KG70 313 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 LYNP07948 512 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 SLC2A1P11166 492 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 MDH2P40926 338 aaKnown RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 GATA4P43694 442 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 RPS7P62081 194 aaKnown RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 PTGES3Q15185 160 aaKnown RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 CXXC5Q7LFL8 322 aaKnown RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 ZDHHC13Q8IUH4 622 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 C1orf87Q8N0U7 546 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 OR4M2Q8NGB6 313 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 OTOSQ8NHW6 89 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 ZNF420Q8TAQ5 688 aaPredicted RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 PRRG3Q9BZD7 231 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 G6PC2Q9NQR9 355 aa19.36■□□□□ 0.69
PTPN4-208ENST00000460289 MRPL15Q9P015 296 aaKnown RBP19.36■□□□□ 0.69
PTPN4-208ENST00000460289 PHF1O43189 567 aaPredicted RBP19.35■□□□□ 0.69
PTPN4-208ENST00000460289 TBX1O43435 398 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 ANXA2P07355 339 aaKnown RBP19.35■□□□□ 0.69
PTPN4-208ENST00000460289 H2BFMP0C1H6 154 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 CA6P23280 308 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 GATA3P23771 443 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 DDOSTP39656 456 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 CD200P41217 278 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 MAB21L1Q13394 359 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 ZMYND11Q15326 602 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 OR8G1Q15617 311 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 ZNF771Q7L3S4 317 aaPredicted RBP19.35■□□□□ 0.69
PTPN4-208ENST00000460289 MOGAT3Q86VF5 341 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 OR52H1Q8NGJ2 320 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 THEM6Q8WUY1 208 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 TMEM158Q8WZ71 300 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 SPSB4Q96A44 273 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 PATZ1Q9HBE1 687 aaKnown RBP19.35■□□□□ 0.69
PTPN4-208ENST00000460289 KRT84Q9NSB2 600 aa19.35■□□□□ 0.69
PTPN4-208ENST00000460289 RNF212BA8MTL3 300 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 J3QLI3 93 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 FOXH1O75593 365 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 IRF2P14316 349 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 CPT2P23786 658 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 OPRL1P41146 370 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 HNRNPA0Q13151 305 aaKnown RBP19.34■□□□□ 0.69
PTPN4-208ENST00000460289 KLBQ86Z14 1044 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 SPERTQ8NA61 448 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 AMELYQ99218 206 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms