RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 HLA-DPB1P04440 258 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 SLC6A9P48067 706 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 CRISP1P54107 249 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 GRB2P62993 217 aaKnown RBP12.26□□□□□ -0.45
HSPG2-207ENST00000453796 MAB21L1Q13394 359 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 ATP6AP1Q15904 470 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 ZNF181Q2M3W8 571 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 TMEM155Q4W5P6 130 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 CXXC5Q7LFL8 322 aaKnown RBP12.26□□□□□ -0.45
HSPG2-207ENST00000453796 SHFQ7M4L6 423 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 PRSS45Q7RTY3 260 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 MRPL21Q7Z2W9 205 aaKnown RBP12.26□□□□□ -0.45
HSPG2-207ENST00000453796 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
HSPG2-207ENST00000453796 LRRC28Q86X40 367 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-207ENST00000453796 CPOQ8IVL8 374 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 BBS1Q8NFJ9 593 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 ZNF420Q8TAQ5 688 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-207ENST00000453796 SPSB4Q96A44 273 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 OTULINQ96BN8 352 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 ZMYND19Q96E35 227 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-207ENST00000453796 TOR3AQ9H497 397 aa12.26□□□□□ -0.45
HSPG2-207ENST00000453796 COL6A5A8TX70 2615 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 ISPDA4D126 451 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 CD300LBA8K4G0 201 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 F5H0A9 414 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-207ENST00000453796 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 SELENOFO60613 162 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 SBK2P0C263 348 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 SLC2A1P11166 492 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 PMELP40967 661 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 OPRL1P41146 370 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 CD200P41217 278 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 GATA4P43694 442 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 SRP9P49458 86 aaKnown RBP12.25□□□□□ -0.45
HSPG2-207ENST00000453796 RAD23AP54725 363 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 BTG1P62324 171 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 ZMYND11Q15326 602 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 SLC35D3Q5M8T2 416 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 C1orf146Q5VVC0 180 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 C1orf229Q6ZS94 237 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-207ENST00000453796 SPATC1Q76KD6 591 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 ASRGL1Q7L266 308 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 CELF2-AS1Q8N7Q2 184 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 OTOSQ8NHW6 89 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 PATZ1Q9HBE1 687 aaKnown RBP12.25□□□□□ -0.45
HSPG2-207ENST00000453796 PAPOLBQ9NRJ5 636 aaKnown RBP12.25□□□□□ -0.45
HSPG2-207ENST00000453796 AP4S1Q9Y587 144 aa12.25□□□□□ -0.45
HSPG2-207ENST00000453796 PHF1O43189 567 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-207ENST00000453796 XRCC2O43543 280 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 PTBP3O95758 552 aaKnown RBP12.24□□□□□ -0.45
HSPG2-207ENST00000453796 PNPP00491 289 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 AVPP01185 164 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 SLC15A1P46059 708 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 CX3CR1P49238 355 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 ESRRGP62508 458 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 PTGES3Q15185 160 aaKnown RBP12.24□□□□□ -0.45
HSPG2-207ENST00000453796 TAF13Q15543 124 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 KDM4DQ6B0I6 523 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 TMPRSS13Q9BYE2 586 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 GABARAPL1Q9H0R8 117 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 OPA3Q9H6K4 179 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 UBAP1Q9NZ09 502 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 KIF17Q9P2E2 1029 aa12.24□□□□□ -0.45
HSPG2-207ENST00000453796 POLR3KQ9Y2Y1 108 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-207ENST00000453796 IGHV3-64DA0A0J9YX35 117 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 CCDC182A6NF36 153 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 MITFO75030 526 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-207ENST00000453796 FSTL3O95633 263 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 CYB5R3P00387 301 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-207ENST00000453796 LYNP07948 512 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 CA6P23280 308 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 FASP25445 335 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 ZFP36P26651 326 aaKnown RBP12.23□□□□□ -0.45
HSPG2-207ENST00000453796 HSD11B1P28845 292 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 MDH2P40926 338 aaKnown RBP12.23□□□□□ -0.45
HSPG2-207ENST00000453796 EFNB1P98172 346 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 KLHL12Q53G59 568 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 ZNF771Q7L3S4 317 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-207ENST00000453796 AMIGO2Q86SJ2 522 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 MOGAT3Q86VF5 341 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 SPICQ8N5J4 248 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 Q8TCH9 128 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 SPRYD4Q8WW59 207 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-207ENST00000453796 LRTOMTQ8WZ04 291 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 PLEKHA8Q96JA3 519 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 SLC22A4Q9H015 551 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 TVP23BQ9NYZ1 205 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 MRPL15Q9P015 296 aaKnown RBP12.23□□□□□ -0.45
HSPG2-207ENST00000453796 ZNF319Q9P2F9 582 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 KLHDC2Q9Y2U9 406 aa12.23□□□□□ -0.45
HSPG2-207ENST00000453796 PPIAL4EA0A075B759 164 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 PPIAL4CA0A0B4J2A2 164 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 GGT3PA6NGU5 568 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 ZAR1LA6NP61 321 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 A8MXK9 166 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 PPIAL4DF5H284 164 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 G3V2T6 193 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 PRKYO43930 277 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 GMDSO60547 372 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 APOC1P02654 83 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms