RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZNF573Q86YE8 665 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 FAM71E2Q8N5Q1 922 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 SLC35G3Q8N808 338 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 CPEB3Q8NE35 698 aaKnown RBP7.71□□□□□ -1.17
LSM5-208ENST00000450169 ZCCHC10Q8TBK6 192 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 MARCH1Q8TCQ1 289 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 TSEN15Q8WW01 171 aaKnown RBP7.71□□□□□ -1.17
LSM5-208ENST00000450169 C22orf15Q8WYQ4 148 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 TIFAQ96CG3 184 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 SLC35A4Q96G79 324 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 RCC1LQ96I51 464 aaKnown RBP7.71□□□□□ -1.17
LSM5-208ENST00000450169 OR10C1Q96KK4 312 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 FAM210BQ96KR6 192 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 C2orf50Q96LR7 162 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 ZNF558Q96NG5 402 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 IL17FQ96PD4 163 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 NMNAT3Q96T66 252 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 AIF1LQ9BQI0 150 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 SMIM3Q9BZL3 60 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 ULBP3Q9BZM4 244 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 OR2AG1Q9H205 316 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 METTL8Q9H825 291 aaKnown RBP7.71□□□□□ -1.17
LSM5-208ENST00000450169 RXFP3Q9NSD7 469 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 GSKIPQ9P0R6 139 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 ADAM29Q9UKF5 820 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 V9GYS6 101 aa7.71□□□□□ -1.17
LSM5-208ENST00000450169 A0A1B0GW64 132 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 A0A1W2PS29 197 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 TLCD2A6NGC4 264 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 TMEM210A6NLX4 147 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 TMEM212A6NML5 194 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 GEMIN2O14893 280 aaKnown RBP7.71□□□□□ -1.18
LSM5-208ENST00000450169 TGOLN2O43493 480 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 PRH1P02810 166 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 IFNA6P05013 189 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 SELPP16109 830 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 PNLIPP16233 465 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 CXCR1P25024 350 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 GDI1P31150 447 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 FCGR2CP31995 323 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 GLIPR1P48060 266 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 TMEM33P57088 247 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 RBX1P62877 108 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 DLK1P80370 383 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 PAX5Q02548 391 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 SLC9A3R2Q15599 337 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 Q6ZVL8 140 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 SLC35D2Q76EJ3 337 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 RTL10Q7L3V2 364 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 TRAPPC6BQ86SZ2 158 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 FJX1Q86VR8 437 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 SULF2Q8IWU5 870 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 C1orf87Q8N0U7 546 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 KDM8Q8N371 416 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 POC1AQ8NBT0 407 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 SLC16A11Q8NCK7 471 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 LFNGQ8NES3 379 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 GRHL3Q8TE85 626 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 ZNF689Q96CS4 500 aaPredicted RBP7.71□□□□□ -1.18
LSM5-208ENST00000450169 RSPRY1Q96DX4 576 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 MRGPRX4Q96LA9 322 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 OR11A1Q9GZK7 315 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 SLC26A1Q9H2B4 701 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 PLEKHA2Q9HB19 425 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 Q9N2J8 555 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 KLHDC2Q9Y2U9 406 aa7.71□□□□□ -1.18
LSM5-208ENST00000450169 NUMA1Q14980 2115 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 A0A0A6YYH2 397 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 A6NJ64 397 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 DUXAA6NLW8 204 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 SLC38A8A6NNN8 435 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 FAM171A2A8MVW0 826 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 SCAF4O95104 1147 aaKnown RBP7.7□□□□□ -1.18
LSM5-208ENST00000450169 TK1P04183 234 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 SEC11BP0C7V7 166 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 PGA3P0DJD8 388 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 ACRP10323 421 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 CCKBRP32239 447 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 PLAURQ03405 335 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 DUSP8Q13202 625 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 MRPL2Q5T653 305 aaKnown RBP7.7□□□□□ -1.18
LSM5-208ENST00000450169 NCR3LG1Q68D85 454 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 TEX38Q6PEX7 206 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 HSD11B1LQ7Z5J1 315 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 RABEPKQ7Z6M1 372 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 ADGRE4PQ86SQ3 457 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 GVQW1Q8N7I0 195 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 NPEPL1Q8NDH3 523 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 ZPLD1Q8TCW7 415 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 METTL21AQ8WXB1 218 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 NINJ1Q92982 152 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 TAAR8Q969N4 342 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 ANKRD9Q96BM1 317 aaPredicted RBP7.7□□□□□ -1.18
LSM5-208ENST00000450169 CLUHP3Q96NS8 147 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 DIRC2Q96SL1 478 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 RARRES2Q99969 163 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 SYT3Q9BQG1 590 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 MENTQ9BUN1 341 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms