RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MALLQ13021 153 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 EIF2B1Q14232 305 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 PTGES3Q15185 160 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 ZMYND11Q15326 602 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF181Q2M3W8 571 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 GLYATL3Q5SZD4 288 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 KDM4DQ6B0I6 523 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 SHFQ7M4L6 423 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 ERI1Q8IV48 349 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 BHLHE23Q8NDY6 225 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 OR10AD1Q8NGE0 317 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 OR2AE1Q8NHA4 323 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 OTOSQ8NHW6 89 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 SGK3Q96BR1 496 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 ZMYND19Q96E35 227 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 COPS4Q9BT78 406 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 TMEM165Q9HC07 324 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 PAPOLBQ9NRJ5 636 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 TRAV20A0A0B4J274 112 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 ZNF878C9JN71 531 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 IFNL4K9M1U5 179 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 FSTL3O95633 263 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 SBK2P0C263 348 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 SLC2A1P11166 492 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 ANPEPP15144 967 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 SRD5A1P18405 259 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 PAICSP22234 425 aaKnown RBP11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 FASP25445 335 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 SLC15A1P46059 708 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 MMP16P51512 607 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 RAD23AP54725 363 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 ESRRGP62508 458 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 TMEM155Q4W5P6 130 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 SLC35D3Q5M8T2 416 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 C1orf146Q5VVC0 180 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 SPATC1Q76KD6 591 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 GLCCI1Q86VQ1 547 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 CELF2-AS1Q8N7Q2 184 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 ZNF454Q8N9F8 522 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 OR6N2Q8NGY6 317 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 OR51F2Q8NH61 342 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 LRTOMTQ8WZ04 291 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 TEAD3Q99594 435 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 GABARAPL1Q9H0R8 117 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 TOR3AQ9H497 397 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 TVP23BQ9NYZ1 205 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 KLHDC2Q9Y2U9 406 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 POLR3KQ9Y2Y1 108 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 TANC2Q9HCD6 1990 aa11.83□□□□□ -0.52
RTFDC1-204ENST00000449062 CCDC182A6NF36 153 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 F5H0A9 414 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 G3V2T6 193 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 SELENOFO60613 162 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 ALOX5APP20292 161 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 CD200P41217 278 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 SLC6A9P48067 706 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 SRP9P49458 86 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 GRB2P62993 217 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 SNAPC1Q16533 368 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 KLHL12Q53G59 568 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 SLX4IPQ5VYV7 408 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 CXXC5Q7LFL8 322 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 PEG10Q86TG7 708 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 ZNF420Q8TAQ5 688 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 Q8TCH9 128 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 OTULINQ96BN8 352 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 RAB39BQ96DA2 213 aa11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 PATZ1Q9HBE1 687 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-204ENST00000449062 IGHV3-64DA0A0J9YX35 117 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 PRKYO43930 277 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 GMDSO60547 372 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 WNT2P09544 360 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 HNF1AP20823 631 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 PCMT1P22061 227 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 CA6P23280 308 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 HCCSP53701 268 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 BTG1P62324 171 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 FAM3AP98173 230 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 TAF13Q15543 124 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 MPPED2Q15777 294 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 AADACL4Q5VUY2 407 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 C12orf73Q69YU5 71 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 MRPL21Q7Z2W9 205 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 MOGAT3Q86VF5 341 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 ZDHHC13Q8IUH4 622 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 SPRYD4Q8WW59 207 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 CENPNQ96H22 339 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 GAL3ST1Q99999 423 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 TMPRSS13Q9BYE2 586 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 SLC22A4Q9H015 551 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 MRPL15Q9P015 296 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 OPN4Q9UHM6 478 aa11.81□□□□□ -0.52
RTFDC1-204ENST00000449062 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 PPIAL4CA0A0B4J2A2 164 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 PRR32B1ATL7 298 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms