RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CD1DP15813 335 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 IGFBP7Q16270 282 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 LRRC26Q2I0M4 334 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TMEM65Q6PI78 240 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 DOK3Q7L591 496 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TBX15Q96SF7 602 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TMEM167BQ9NRX6 74 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 IL17BQ9UHF5 180 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SALL4Q9UJQ4 1053 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 NCOA3Q9Y6Q9 1424 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TGIF2-C20orf24A0A0A6YYL0 155 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 GDF10P55107 478 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 RPS25P62851 125 aaKnown RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 IL10RAQ13651 578 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SMIM21Q3B7S5 101 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 THOC3Q96J01 351 aaKnown RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 HIST1H4GQ99525 98 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 PRO1933Q9H354 126 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 POMT2Q9UKY4 750 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TNFRSF10CO14798 259 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF253O75346 499 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 GYPBP06028 91 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 GRPP07492 148 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 ALOX5APP20292 161 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 RPS4Y2Q8TD47 263 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TMEM40Q8WWA1 233 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 DPH3Q96FX2 82 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 CBLCQ9ULV8 474 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 MYADML2A6NDP7 307 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 H7C2G1 150 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 M0R296 226 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 FGF2P09038 288 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 ST6GAL1P15907 406 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SRP9P49458 86 aaKnown RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 DLK1P80370 383 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SUSD3Q96L08 255 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 DYSFO75923 2080 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 UBE2L5PA0A1B0GUS4 154 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 MAP1LC3B2A6NCE7 125 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 UNGP13051 313 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 IL1RNP18510 177 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 ANKRD55Q3KP44 614 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TMEM207Q6UWW9 146 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SCMH1Q96GD3 660 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 FER1L6-AS2Q96M78 137 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 MAP1LC3BQ9GZQ8 125 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SPATA6Q9NWH7 488 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 GDE1Q9NZC3 331 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 NFS1Q9Y697 457 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SPATA31A3Q5VYP0 1347 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 MT-ATP6P00846 226 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 CST3P01034 146 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 RPA2P15927 270 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 KIR2DS2P43631 304 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 CAMPP49913 170 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 PARS2Q7L3T8 475 aaKnown RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 A0A0J9YY10 115 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 CTDSP2O14595 271 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 KLRC4O43908 158 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 F11P03951 625 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 OR5AC1P0C628 307 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 PMCHL1Q16048 86 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 MIDNQ504T8 468 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 ACSM6Q6P461 480 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 MYPOPQ86VE0 399 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 PDPNQ86YL7 162 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 CMTM8Q8IZV2 173 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 D2HGDHQ8N465 521 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 OR2A5Q96R48 311 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 LPAR5Q9H1C0 372 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SPNS1Q9H2V7 528 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SH2D2AQ9NP31 389 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 SDR39U1Q9NRG7 319 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 PAM16Q9Y3D7 125 aa8.18□□□□□ -1.1
NIPBL-202ENST00000448238 PTRH2Q9Y3E5 179 aaKnown RBP8.18□□□□□ -1.1
NIPBL-202ENST00000448238 TRAV27A0A087WT01 109 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 BCL2L11O43521 198 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 RPS4Y1P22090 263 aaKnown RBP8.17□□□□□ -1.1
NIPBL-202ENST00000448238 GPR3P46089 330 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF502Q8TBZ5 544 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 SLC25A46Q96AG3 418 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 GABRG3Q99928 467 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 FOXJ3Q9UPW0 622 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 SHANK1Q9Y566 2161 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF195O14628 629 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 PEX10O60683 326 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 LRP3O75074 770 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ALPLP05186 524 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ZBTB25P24278 435 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 Q56UQ5 140 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 RPS26P11Q5JNZ5 115 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-202ENST00000448238 Q8WTZ3 238 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 HSD17B8Q92506 261 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ACY3Q96HD9 319 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 C11orf54Q9H0W9 315 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms