RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 ZNF92Q03936 586 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TRIM25Q14258 630 aaKnown RBP13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TEX30Q5JUR7 227 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 DRAM2Q6UX65 266 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 DCXRQ7Z4W1 244 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 DHFR2Q86XF0 187 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR9Q1Q8NGQ5 310 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SPTSSAQ969W0 71 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 NSL1Q96IY1 281 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CCT8L2Q96SF2 557 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 NTN4Q9HB63 628 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF69Q9UC07 566 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MIOXQ9UGB7 285 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR5V1Q9UGF6 321 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 LRRC30A6NM36 301 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SOX14O95416 240 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 GYPBP06028 91 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 RPS2P15880 293 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SPI1P17947 270 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MPPED2Q15777 294 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ARMCX4Q5H9R4 360 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 GLYATL3Q5SZD4 288 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 LINC01590Q5TEZ4 76 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR2T5Q6IEZ7 315 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF841Q6ZN19 808 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 DOK3Q7L591 496 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MRPL21Q7Z2W9 205 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 C1orf87Q8N0U7 546 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 BCL6BQ8N143 479 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SIGLECL1Q8N7X8 197 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF511Q8NB15 262 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR2T33Q8NG76 320 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR2T29Q8NH02 315 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR2AE1Q8NHA4 323 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SPRYD4Q8WW59 207 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 C1orf147Q96MC9 270 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MRI1Q9BV20 369 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TBC1D23Q9NUY8 699 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ARMC1Q9NVT9 282 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 BAIAP2Q9UQB8 552 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 U3KQV3 271 aa13.24□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 IGHV2-70DA0A0C4DH43 119 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 FAM20BO75063 409 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CLUP10909 449 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CA6P23280 308 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 FMO3P31513 532 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PSMB10P40306 273 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ENTPD1P49961 510 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 HOXA4Q00056 320 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 FAM98BQ52LJ0 330 aaKnown RBP13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PRAMEF6Q5VXH4 476 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 RAB40AQ8WXH6 277 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SPSB4Q96A44 273 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 NEIL1Q96FI4 390 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF48Q96MX3 618 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 NIPSNAP1Q9BPW8 284 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SLC22A4Q9H015 551 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 REEP1Q9H902 201 aa13.23□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF593O00488 134 aaPredicted RBP13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ACOT8O14734 319 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 GMDSO60547 372 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SPARCP09486 303 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 IGHV4-38-2P0DP08 117 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CALB2P22676 271 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PITPNBP48739 271 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 GNB2P62879 340 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR8G1Q15617 311 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 LYPD2Q6UXB3 125 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 LRRN1Q6UXK5 716 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 DCDC5Q6ZRR9 648 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 C9orf139Q6ZV77 190 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 UPRTQ96BW1 309 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SLAMF6Q96DU3 332 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 KCNJ15Q99712 375 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ADAT1Q9BUB4 502 aaKnown RBP13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CMC2Q9NRP2 79 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 UFSP2Q9NUQ7 469 aa13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MRPL15Q9P015 296 aaKnown RBP13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PRPF19Q9UMS4 504 aaKnown RBP13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 NOP16Q9Y3C1 178 aaKnown RBP13.22□□□□□ -0.29
SPTLC1P1-201ENST00000447199 KIR2DS1A0A191URI9 304 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 DHRS12A0PJE2 317 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TNFRSF13BO14836 293 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 FAM107AO95990 144 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PLATP00750 562 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 RAP2AP10114 183 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SLC2A1P11166 492 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 IRF2P14316 349 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PRTN3P24158 256 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PRKXP51817 358 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 GK3PQ14409 553 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 AWAT1Q58HT5 328 aa13.21□□□□□ -0.29
SPTLC1P1-201ENST00000447199 WDR25Q64LD2 544 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms