RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 NR4A1P22736 598 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 OTX1P32242 354 aaPredicted RBP14.82□□□□□ -0.04
LIME1-202ENST00000444951 RAD52P43351 418 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 GBX2P52951 348 aaPredicted RBP14.82□□□□□ -0.04
LIME1-202ENST00000444951 UCP2P55851 309 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 ODF4Q2M2E3 257 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 SNAI3Q3KNW1 292 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 KCTD21Q4G0X4 260 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 ZNF704Q6ZNC4 412 aaPredicted RBP14.82□□□□□ -0.04
LIME1-202ENST00000444951 KCTD20Q7Z5Y7 419 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 SYS1Q8N2H4 156 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 NANOGP1Q8N7R0 232 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 RORBQ92753 470 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 PPP1R14AQ96A00 147 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 PELI1Q96FA3 418 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 MND1Q9BWT6 205 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 CDCA4Q9BXL8 241 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 POFUT1Q9H488 388 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 EDARQ9UNE0 448 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 R4GMQ9 66 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 NSD1Q96L73 2696 aaPredicted RBP14.82□□□□□ -0.04
LIME1-202ENST00000444951 E9PI62 339 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 GOSR1O95249 250 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 THBS4P35443 961 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 RGS6P49758 472 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 PRSS12P56730 875 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 PPP1CBP62140 327 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 MED22Q15528 200 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 BCL2L15Q5TBC7 163 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 Q71RC1 249 aaPredicted RBP14.81□□□□□ -0.04
LIME1-202ENST00000444951 OR52N1Q8NH53 320 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 OR2AE1Q8NHA4 323 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 APOBEC3DQ96AK3 386 aaPredicted RBP14.81□□□□□ -0.04
LIME1-202ENST00000444951 SIGLEC11Q96RL6 698 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 C1QTNF5Q9BXJ0 243 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 FAM206AQ9NX38 181 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 SLC22A13Q9Y226 551 aa14.81□□□□□ -0.04
LIME1-202ENST00000444951 ANK3Q12955 4377 aaKnown RBP14.8□□□□□ -0.04
LIME1-202ENST00000444951 ROS1P08922 2347 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 FN1P02751 2386 aaKnown RBP14.8□□□□□ -0.04
LIME1-202ENST00000444951 PNMA8CA0A1B0GUJ8 204 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 TMEM129A0AVI4 362 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 H3BSH0 61 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 FOSL1P15407 271 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 PCSK6P29122 969 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 GTF2A1P52655 376 aaPredicted RBP14.8□□□□□ -0.04
LIME1-202ENST00000444951 WNT4P56705 351 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 IRF3Q14653 427 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 HLXQ14774 488 aaPredicted RBP14.8□□□□□ -0.04
LIME1-202ENST00000444951 ZNF773Q6PK81 442 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 UNQ6126/PRO20091Q6UXV3 157 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 COMMD2Q86X83 199 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 ZFP41Q8N8Y5 198 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 OR8B12Q8NGG6 310 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 SLC25A40Q8TBP6 338 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 AKAP1Q92667 903 aaKnown RBP eCLIP14.8□□□□□ -0.04
LIME1-202ENST00000444951 OR5M11Q96RB7 305 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 NR1H4Q96RI1 486 aaPredicted RBP14.8□□□□□ -0.04
LIME1-202ENST00000444951 BCL2L14Q9BZR8 327 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 OR2J1Q9GZK6 312 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 PBOV1Q9GZY1 135 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 SP140LQ9H930 580 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 TBCCD1Q9NVR7 557 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 BABAM2Q9NXR7 383 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 ZNF319Q9P2F9 582 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 OR52A1Q9UKL2 312 aa14.8□□□□□ -0.04
LIME1-202ENST00000444951 HEATR1Q9H583 2144 aaKnown RBP14.8□□□□□ -0.04
LIME1-202ENST00000444951 E7EQL1 145 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 SRSF10O75494 262 aaKnown RBP14.79□□□□□ -0.04
LIME1-202ENST00000444951 HSMCR30P0CW71 290 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 DCTDP32321 178 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 FABP6P51161 128 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 NKX6-1P78426 367 aaPredicted RBP14.79□□□□□ -0.04
LIME1-202ENST00000444951 MALLQ13021 153 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 DOC2BQ14184 412 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 TIGD6Q17RP2 521 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 ZNF672Q499Z4 452 aaPredicted RBP14.79□□□□□ -0.04
LIME1-202ENST00000444951 GLYATL3Q5SZD4 288 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 XAF1Q6GPH4 301 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 RGS7BPQ6MZT1 257 aaPredicted RBP14.79□□□□□ -0.04
LIME1-202ENST00000444951 PRSS45Q7RTY3 260 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 CATSPERDQ86XM0 798 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 SPARTQ8N0X7 666 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 PRSS35Q8N3Z0 413 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 SVOPQ8N4V2 548 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 TSPAN14Q8NG11 270 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 OR5L1Q8NGL2 311 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 LILRB1Q8NHL6 650 aaPredicted RBP14.79□□□□□ -0.04
LIME1-202ENST00000444951 TMEM204Q9BSN7 226 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 OR10A2Q9H208 303 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 UBTD1Q9HAC8 227 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 CA10Q9NS85 328 aa14.79□□□□□ -0.04
LIME1-202ENST00000444951 BEX4Q9NWD9 120 aaPredicted RBP14.79□□□□□ -0.04
LIME1-202ENST00000444951 CISD1Q9NZ45 108 aaKnown RBP14.79□□□□□ -0.04
LIME1-202ENST00000444951 RAI1Q7Z5J4 1906 aaPredicted RBP14.78□□□□□ -0.04
LIME1-202ENST00000444951 LALBAP00709 142 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 RPSAP08865 295 aaKnown RBP14.78□□□□□ -0.04
LIME1-202ENST00000444951 ATP6V1B1P15313 513 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 MPV17P39210 176 aa14.78□□□□□ -0.04
LIME1-202ENST00000444951 KIR3DL2P43630 455 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms