RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 HLA-BQ31612 363 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 PRAMEF20Q5VT98 475 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 OR52W1Q6IF63 320 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 GSG1LQ6UXU4 331 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 RTN4RL2Q86UN3 420 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 OR5M8Q8NGP6 311 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 C1orf147Q96MC9 270 aaPredicted RBP14.16□□□□□ -0.14
SHQ1-202ENST00000444040 LOC102723996A0A087X1L8 192 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 hCG_1807616A0A1W2PRN6 198 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 FGF5P12034 268 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF20P17024 532 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 M6PRP20645 277 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 ABHD12BQ7Z5M8 362 aaPredicted RBP14.16□□□□□ -0.14
SHQ1-202ENST00000444040 SLC25A42Q86VD7 318 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 OR10R2Q8NGX6 335 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 SPACA5Q96QH8 159 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 MFFQ9GZY8 342 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 MED9Q9NWA0 146 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 NUP50Q9UKX7 468 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 SSX5O60225 188 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 SCGNO76038 276 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 ERCC1P07992 297 aaPredicted RBP14.15□□□□□ -0.14
SHQ1-202ENST00000444040 CELA2AP08217 269 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 ZBTB25P24278 435 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 MPGP29372 298 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 ZMYND11Q15326 602 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 TMEM81Q6P7N7 255 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 OR6K3Q8NGY3 331 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 NICN1Q9BSH3 213 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 SELENOIQ9C0D9 397 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 LPAR5Q9H1C0 372 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 GPR84Q9NQS5 396 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 KCNK7Q9Y2U2 307 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 SCO1O75880 301 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 HLA-AP01891 365 aaKnown RBP14.15□□□□□ -0.14
SHQ1-202ENST00000444040 CCL1P22362 96 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 FKBP2P26885 142 aaKnown RBP14.15□□□□□ -0.14
SHQ1-202ENST00000444040 CD96P40200 585 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 TAF13Q15543 124 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF660Q6AZW8 331 aaPredicted RBP14.15□□□□□ -0.14
SHQ1-202ENST00000444040 TMPPEQ6ZT21 453 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 DTWD2Q8NBA8 298 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 CCDC120Q96HB5 630 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 CXorf58Q96LI9 332 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 WDR54Q9H977 334 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF224Q9NZL3 707 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 PILRBQ9UKJ0 227 aa14.15□□□□□ -0.14
SHQ1-202ENST00000444040 A0A0A6YYD4 124 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 MFSD2BA6NFX1 497 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 SULT2B1O00204 365 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 TP53I11O14683 189 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 CD34P28906 385 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 TMEM65Q6PI78 240 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 ZDHHC22Q8N966 263 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 TMEM104Q8NE00 496 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 ZBTB8AQ96BR9 441 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 CST11Q9H112 138 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 KCNMB2Q9Y691 235 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF726A6NNF4 738 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 IL2RAP01589 272 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 LIPCP11150 499 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 HRH1P35367 487 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 CASRP41180 1078 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 SLC35A1P78382 337 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 H3F3AP84243 136 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 GK2Q14410 553 aaPredicted RBP14.14□□□□□ -0.15
SHQ1-202ENST00000444040 PMS2CLQ68D20 193 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 LPCAT3Q6P1A2 487 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 GLIPR1L1Q6UWM5 242 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 BEST3Q8N1M1 668 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 COQ8AQ8NI60 647 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 NAT6Q93015 286 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 C1QTNF6Q9BXI9 259 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 SDHAF2Q9NX18 166 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 HLA-GP17693 338 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 CX3CR1P49238 355 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 PPP1R1AQ13522 171 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 PGAP1Q75T13 922 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 OR2W3Q7Z3T1 314 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 LYG2Q86SG7 212 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 GTPBP8Q8N3Z3 284 aaPredicted RBP14.14□□□□□ -0.15
SHQ1-202ENST00000444040 DMRTA2Q96SC8 542 aa14.14□□□□□ -0.15
SHQ1-202ENST00000444040 MRPS28Q9Y2Q9 187 aaKnown RBP14.14□□□□□ -0.15
SHQ1-202ENST00000444040 NOP16Q9Y3C1 178 aaKnown RBP14.14□□□□□ -0.15
SHQ1-202ENST00000444040 LOC100509620A0A075B734 347 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 IGHV1-45A0A0A0MS14 117 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 OR5H14A6NHG9 310 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 E9PLN8 166 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 STK17BO94768 372 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 CHRM2P08172 466 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 COMMD2Q86X83 199 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 ZNF101Q8IZC7 436 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 SSC4DQ8WTU2 575 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 FAM71F1Q96KD3 344 aaPredicted RBP14.13□□□□□ -0.15
SHQ1-202ENST00000444040 IMMP1LQ96LU5 166 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 OR2AT4A6NND4 320 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 UMODP07911 640 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 OR3A4PP47883 348 aa14.13□□□□□ -0.15
SHQ1-202ENST00000444040 CLDN17P56750 224 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms