RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 GID4Q8IVV7 300 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZNF283Q8N7M2 679 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 LINC01356Q8N9X3 169 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 TMEM163Q8TC26 289 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 ERGIC1Q969X5 290 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 SPSB4Q96A44 273 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 RAB39BQ96DA2 213 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 MSI2Q96DH6 328 aaKnown RBP10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 CIB1Q99828 191 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 RGCCQ9H4X1 137 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 TMEM100Q9NV29 134 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 HAO2Q9NYQ3 351 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 H2AFY2Q9P0M6 372 aaPredicted RBP10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZNF391Q9UJN7 358 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 LAMP5Q9UJQ1 280 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 CDC42EP3Q9UKI2 254 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 KCNS2Q9ULS6 477 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 ORC6Q9Y5N6 252 aa10.63□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZFHX3Q15911 3703 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 LOC100289279A0A1B0GTE1 492 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 LRP5LA4QPB2 252 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 ACOD1A6NK06 481 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 PRKYO43930 277 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 GMDSO60547 372 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 MITFO75030 526 aaPredicted RBP10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 FSTL3O95633 263 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 H2BFMP0C1H6 154 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 ALOX5APP20292 161 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 CPT2P23786 658 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 DCTDP32321 178 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 CX3CR1P49238 355 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 RAD23AP54725 363 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZNF181Q2M3W8 571 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 SNAI3Q3KNW1 292 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 OR5AS1Q8N127 324 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 TCEANCQ8N8B7 351 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 SPERTQ8NA61 448 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 BBS1Q8NFJ9 593 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 CLDND2Q8NHS1 167 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 THEM6Q8WUY1 208 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 SPRYD4Q8WW59 207 aaPredicted RBP10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 ASB17Q8WXJ9 295 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 CCL17Q92583 94 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 OR2V2Q96R30 315 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 SEMA6AQ9H2E6 1030 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 TMEM106BQ9NUM4 274 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 USE1Q9NZ43 259 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 MRPL15Q9P015 296 aaKnown RBP10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 PPP1R3CQ9UQK1 317 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 WIPI2Q9Y4P8 454 aa10.62□□□□□ -0.71
CDCA4P3-201ENST00000442572 GGT3PA6NGU5 568 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 CD300LBA8K4G0 201 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 H3BNX3 289 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 PHYHO14832 338 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 SELENOFO60613 162 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZNF254O75437 659 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 TGFAP01135 160 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 ALPLP05186 524 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZNF16P17020 682 aaPredicted RBP10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 HNF1AP20823 631 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 EPHA2P29317 976 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 GATA4P43694 442 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 DVL1P1P54792 670 aaPredicted RBP10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 LMO4P61968 165 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZNF92Q03936 586 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 MZT1Q08AG7 82 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 TMED1Q13445 227 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 CHRFAM7AQ494W8 412 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 GLYATL3Q5SZD4 288 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 AADACL4Q5VUY2 407 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 MEPCEQ7L2J0 689 aaKnown RBP10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 PRSS45Q7RTY3 260 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 FTMTQ8N4E7 242 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 PLPP7Q8NBV4 271 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 OR8J1Q8NGP2 316 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 ITLN1Q8WWA0 313 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 TRUB1Q8WWH5 349 aaKnown RBP10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 MEGF10Q96KG7 1140 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 PKP2Q99959 881 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 GCM1Q9NP62 436 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 NPTNQ9Y639 398 aa10.61□□□□□ -0.71
CDCA4P3-201ENST00000442572 CCDC182A6NF36 153 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 SAC3D1A6NKF1 404 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 LRRC30A6NM36 301 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 MLNRO43193 412 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 ANXA2P07355 339 aaKnown RBP10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 IL2RGP31785 369 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 CD200P41217 278 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 NAA10P41227 235 aaPredicted RBP10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 ALDH3A2P51648 485 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 ZNF121P58317 390 aaPredicted RBP10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 PSMA6P60900 246 aaKnown RBP10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 CDC42P60953 191 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 ROM1Q03395 351 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 MVKQ03426 396 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 POU4F2Q12837 409 aa10.6□□□□□ -0.71
CDCA4P3-201ENST00000442572 TIGD6Q17RP2 521 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms