RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 OPA3Q9H6K4 179 aa7.16□□□□□ -1.26
CCDC39-201ENST00000442201 EXOSC4Q9NPD3 245 aaKnown RBP7.16□□□□□ -1.26
CCDC39-201ENST00000442201 MRPL22Q9NWU5 206 aaKnown RBP7.16□□□□□ -1.26
CCDC39-201ENST00000442201 SLCO1C1Q9NYB5 712 aa7.16□□□□□ -1.26
CCDC39-201ENST00000442201 MCTS1Q9ULC4 181 aaKnown RBP7.16□□□□□ -1.26
CCDC39-201ENST00000442201 LIPGQ9Y5X9 500 aa7.16□□□□□ -1.26
CCDC39-201ENST00000442201 ALPK2Q86TB3 2170 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF716A6NP11 495 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 K7ENP7 123 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF593O00488 134 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-201ENST00000442201 CYTIPO60759 359 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 PTBP3O95758 552 aaKnown RBP7.15□□□□□ -1.26
CCDC39-201ENST00000442201 SPARCP09486 303 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 ALOX5APP20292 161 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 RASGEF1BQ0VAM2 473 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 INO80CQ6PI98 192 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-201ENST00000442201 RBMS3Q6XE24 437 aaKnown RBP7.15□□□□□ -1.26
CCDC39-201ENST00000442201 LRRC69Q6ZNQ3 347 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 GDPGP1Q6ZNW5 385 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 ZIC4Q8N9L1 334 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 KDF1Q8NAX2 398 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-201ENST00000442201 OTOSQ8NHW6 89 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 THEM6Q8WUY1 208 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 PCNPQ8WW12 178 aaKnown RBP7.15□□□□□ -1.26
CCDC39-201ENST00000442201 UPRTQ96BW1 309 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 OR2M2Q96R28 347 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 KLHL9Q9P2J3 617 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 GNG8Q9UK08 70 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 STUB1Q9UNE7 303 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 GAB2Q9UQC2 676 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 RCE1Q9Y256 329 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 FLVCR1Q9Y5Y0 555 aa7.15□□□□□ -1.26
CCDC39-201ENST00000442201 CRTAPO75718 401 aaPredicted RBP7.15□□□□□ -1.27
CCDC39-201ENST00000442201 QDPRP09417 244 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 TACSTD2P09758 323 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 RPS27P42677 84 aaKnown RBP7.15□□□□□ -1.27
CCDC39-201ENST00000442201 MAP2K3P46734 347 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 HIST3H3Q16695 136 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 SLC18B1Q6NT16 456 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 PGAP1Q75T13 922 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 FAM220AQ7Z4H9 259 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 OR10H5Q8NGA6 315 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 TMEM203Q969S6 136 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 MCHR2Q969V1 340 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 PRRG4Q9BZD6 226 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 ING1Q9UK53 422 aaPredicted RBP7.15□□□□□ -1.27
CCDC39-201ENST00000442201 SSR3Q9UNL2 185 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 KLHDC2Q9Y2U9 406 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 ACACAQ13085 2346 aa7.15□□□□□ -1.27
CCDC39-201ENST00000442201 C7orf66A4D0T2 115 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 MARCH11A6NNE9 402 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 PDCD5O14737 125 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 MAGEB4O15481 346 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 MPZL1O95297 269 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 IGHG3P01860 377 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 CRYABP02511 175 aaKnown RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SPP1P10451 314 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 CPN1P15169 458 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 GABRA5P31644 462 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ID4P47928 161 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 MEP1BQ16820 701 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 OTPQ5XKR4 325 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SLC25A47Q6Q0C1 308 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 Q6ZS92 163 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 TMEM123Q8N131 208 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF454Q8N9F8 522 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 AKR7LQ8NHP1 331 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ABHD3Q8WU67 409 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ASB17Q8WXJ9 295 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF775Q96BV0 537 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 PELI1Q96FA3 418 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 LRRC46Q96FV0 321 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 LURAP1Q96LR2 239 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SEC61A2Q9H9S3 476 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 KCNG2Q9UJ96 466 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 IKZF2Q9UKS7 526 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 DCHS1Q96JQ0 3298 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 IQCMA0A1B0GVH7 501 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 E9PI62 339 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ORC5O43913 435 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF432O94892 652 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 HLA-DPB1P04440 258 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 LPLP06858 475 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 GAAP10253 952 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 RAB3BP20337 219 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 CEACAM6P40199 344 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 GUCA1AP43080 201 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 CRYBB2P43320 205 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 KCNJ3P48549 501 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SELENOPP49908 381 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 UCNP55089 124 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 DHODHQ02127 395 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 EGR3Q06889 387 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SOWAHCQ53LP3 525 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SAPCD1Q5SSQ6 148 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 DHRS7BQ6IAN0 325 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ARL9Q6T311 187 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 AAED1Q7RTV5 226 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 REC114Q7Z4M0 266 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms