RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 RAB1BQ9H0U4 201 aa15.13■□□□□ 0.01
CCDC188-201ENST00000439765 POFUT1Q9H488 388 aa15.13■□□□□ 0.01
CCDC188-201ENST00000439765 PNRC2Q9NPJ4 139 aaKnown RBP15.13■□□□□ 0.01
CCDC188-201ENST00000439765 TAAR3PQ9P1P4 343 aa15.13■□□□□ 0.01
CCDC188-201ENST00000439765 FBXO9Q9UK97 447 aaPredicted RBP15.13■□□□□ 0.01
CCDC188-201ENST00000439765 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.13■□□□□ 0.01
CCDC188-201ENST00000439765 RNF223E7ERA6 249 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 IGHA1P01876 353 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 CDK1P06493 297 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 ERCC1P07992 297 aaPredicted RBP15.12■□□□□ 0.01
CCDC188-201ENST00000439765 GCH1P30793 250 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 MVKQ03426 396 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 DCXRQ7Z4W1 244 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 ACBD7Q8N6N7 88 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 OR10H4Q8NGA5 316 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 OTOSQ8NHW6 89 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 KLF14Q8TD94 323 aaPredicted RBP15.12■□□□□ 0.01
CCDC188-201ENST00000439765 MNTQ99583 582 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 ZNF696Q9H7X3 374 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 ERVK-18Q9QC07 812 aa15.12■□□□□ 0.01
CCDC188-201ENST00000439765 DIMT1Q9UNQ2 313 aaKnown RBP15.12■□□□□ 0.01
CCDC188-201ENST00000439765 COL6A5A8TX70 2615 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 IGHV4-30-2A0A087WSY4 118 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 F5H5K5 113 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 RGS10O43665 173 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 F12P00748 615 aaPredicted RBP15.11■□□□□ 0.01
CCDC188-201ENST00000439765 ALOX5APP20292 161 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 C21orf33P30042 268 aaPredicted RBP15.11■□□□□ 0.01
CCDC188-201ENST00000439765 CARTPTQ16568 116 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 ZNF718Q3SXZ3 478 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 PRIMA1Q86XR5 153 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 ZNF454Q8N9F8 522 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 MAPK1IP1LQ8NDC0 245 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 OR10S1Q8NGN2 331 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 GTF3AQ92664 365 aaKnown RBP15.11■□□□□ 0.01
CCDC188-201ENST00000439765 SIGLEC11Q96RL6 698 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 JAM3Q9BX67 310 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 TBCCD1Q9NVR7 557 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 LAMP5Q9UJQ1 280 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 COPS3Q9UNS2 423 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 TMEM14AQ9Y6G1 99 aa15.11■□□□□ 0.01
CCDC188-201ENST00000439765 ZNF670-ZNF695F2Z2N8 137 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 MRPS14O60783 128 aaKnown RBP15.1■□□□□ 0.01
CCDC188-201ENST00000439765 LYNP07948 512 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 ACTC1P68032 377 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 ACTA1P68133 377 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 MBNL2Q5VZF2 373 aaKnown RBP15.1■□□□□ 0.01
CCDC188-201ENST00000439765 SPATC1Q76KD6 591 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 PRSS48Q7RTY5 328 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 SNX33Q8WV41 574 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 FAM168AQ92567 244 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 TBX5Q99593 518 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 ZNF649Q9BS31 505 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 MS4A5Q9H3V2 200 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 INPP5EQ9NRR6 644 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 SLCO1C1Q9NYB5 712 aa15.1■□□□□ 0.01
CCDC188-201ENST00000439765 EXOSC1Q9Y3B2 195 aaKnown RBP15.1■□□□□ 0.01
CCDC188-201ENST00000439765 A0A1W2PQL4 384 aaPredicted RBP15.09■□□□□ 0.01
CCDC188-201ENST00000439765 DAPL1A0PJW8 107 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 IGHV3-13P01766 116 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 RPSAP08865 295 aaKnown RBP15.09■□□□□ 0.01
CCDC188-201ENST00000439765 HTR1AP08908 422 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 CDH15P55291 814 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 ZNF85Q03923 595 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 ECH1Q13011 328 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 EIF2B1Q14232 305 aaKnown RBP15.09■□□□□ 0.01
CCDC188-201ENST00000439765 RNLSQ5VYX0 342 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 LHFPL3Q86UP9 236 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 C1orf174Q8IYL3 243 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 THEM6Q8WUY1 208 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 DCLRE1CQ96SD1 692 aaKnown RBP15.09■□□□□ 0.01
CCDC188-201ENST00000439765 ABHD6Q9BV23 337 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 DDX28Q9NUL7 540 aaKnown RBP15.09■□□□□ 0.01
CCDC188-201ENST00000439765 ERVK13-1Q9NX77 482 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 GPR160Q9UJ42 338 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 KLHDC2Q9Y2U9 406 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 STARD10Q9Y365 291 aa15.09■□□□□ 0.01
CCDC188-201ENST00000439765 MAGEA13PA6NCF6 341 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 H3BSA7 217 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 PHYHO14832 338 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 MT-ND2P03891 347 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 CSF3P09919 207 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 ACSM4P0C7M7 580 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 LIMS3P0CW19 117 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 LIMS4P0CW20 117 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 DAOP14920 347 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 SLC6A9P48067 706 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 RGS6P49758 472 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 RSPO1Q2MKA7 263 aaPredicted RBP15.08■□□□□ 0.01
CCDC188-201ENST00000439765 KRTAP27-1Q3LI81 207 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 SSX6Q7RTT6 188 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 RFLNBQ8N5W9 214 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 ST7LQ8TDW4 575 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 NEU4Q8WWR8 484 aaPredicted RBP15.08■□□□□ 0.01
CCDC188-201ENST00000439765 SLAMF6Q96DU3 332 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 AMELYQ99218 206 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 CDCA4Q9BXL8 241 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 CCDC90BQ9GZT6 254 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 CENPMQ9NSP4 180 aa15.08■□□□□ 0.01
CCDC188-201ENST00000439765 CHCHD3Q9NX63 227 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms