RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TEX50A0A1B0GTY4 177 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 A0A1W2PPC4 97 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 OR2C1O95371 312 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 MYOGP15173 224 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 FGF7P21781 194 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 CCL7P80098 99 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 MS4A2Q01362 244 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 HLA-BQ31612 363 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 OR2G6Q5TZ20 316 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 OR51E1Q8TCB6 317 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 GPX8Q8TED1 209 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 APOBEC4Q8WW27 367 aaKnown RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 Q96M85 177 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM38AQ9H6F2 299 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 CYSLTR2Q9NS75 346 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 IGHV3-64DA0A0J9YX35 117 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 NPY1RP25929 384 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 FAM53BQ14153 422 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 TRIP6Q15654 476 aaKnown RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF789Q5FWF6 425 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM182Q6ZP80 229 aaPredicted RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 CARFQ8N187 725 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM171Q8WVE6 324 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 CCL17Q92583 94 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 LHX4Q969G2 390 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ADAT1Q9BUB4 502 aaKnown RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 GON7Q9BXV9 100 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 NTNG1Q9Y2I2 539 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 A0A0U1RQS6 177 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ONECUT2O95948 504 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 SCG5P05408 212 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 RAB9AP51151 201 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM240Q5SV17 173 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 EIF4E3Q8N5X7 224 aaKnown RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 OR52N1Q8NH53 320 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 PLA2G12AQ9BZM1 189 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 GPR84Q9NQS5 396 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 NSG2Q9Y328 171 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF142P52746 1687 aaPredicted RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 LOC107986453A0A1B0GWG9 222 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 KLF3P57682 345 aaPredicted RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 AVPI1Q5T686 147 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 B3GNT8Q7Z7M8 397 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 GPBAR1Q8TDU6 330 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 C3orf30Q96M34 536 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 GNRHR2Q96P88 292 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 BRWD1Q9NSI6 2320 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 CLEC18AA5D8T8 446 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 GFYI3L273 518 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ALOX5APP20292 161 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 AQP6Q13520 282 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ARIH2OSQ8N7S6 290 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 CLEC18CQ8NCF0 446 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 OR1L4Q8NGR5 311 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 BAHD1Q8TBE0 780 aaPredicted RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF486Q96H40 463 aaPredicted RBP10.16□□□□□ -0.78
SCN4A-201ENST00000435607 DAPP1Q9UN19 280 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 DUS4LO95620 317 aaKnown RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 SSTR2P30874 369 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 TNFAIP6P98066 277 aaPredicted RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 KCNMB1Q16558 191 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM102Q8N9M5 508 aaPredicted RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ANKRD53Q8N9V6 530 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ZMAT3Q9HA38 289 aaKnown RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 HINT3Q9NQE9 182 aaKnown RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ELFN2Q5R3F8 820 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 OSR2Q8N2R0 312 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF784Q8NCA9 323 aaPredicted RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 LTB4R2Q9NPC1 389 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 TBC1D29Q9UFV1 150 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 MBD1Q9UIS9 605 aaPredicted RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 LSM2Q9Y333 95 aaKnown RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 LMO7DNF2Z398 122 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 SLC25A4P12235 298 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 P2RX3P56373 397 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 GNG3P63215 75 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF239Q16600 458 aaKnown RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 SSX8Q7RTT4 187 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ASCL5Q7RTU5 278 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ARHGDIGQ99819 225 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 PIGMQ9H3S5 423 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 TMIGD3P0DMS9 266 aaPredicted RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 OR13C7P0DN81 318 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 EPXP11678 715 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 M6PRP20645 277 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 TEAD1P28347 426 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ARRB2P32121 409 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 NKX2-5P52952 324 aaPredicted RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 SSPNQ14714 243 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 TAS2R4Q9NYW5 299 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 CIDEAO60543 219 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ATP1B1P05026 303 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF26P17031 533 aaPredicted RBP10.15□□□□□ -0.78
SCN4A-201ENST00000435607 CD200P41217 278 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 C21orf58P58505 322 aa10.15□□□□□ -0.78
SCN4A-201ENST00000435607 HERVK_113P61574 105 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms