RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 RNF7Q9UBF6 113 aa13.5□□□□□ -0.25
ACTB-205ENST00000432588 CD300LBA8K4G0 201 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 GMDSO60547 372 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 CA6P23280 308 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 PSMB10P40306 273 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 FGF12P61328 243 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.49□□□□□ -0.25
ACTB-205ENST00000432588 DBPQ10586 325 aaPredicted RBP13.49□□□□□ -0.25
ACTB-205ENST00000432588 MPPED2Q15777 294 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 SAMD4BQ5PRF9 694 aaKnown RBP13.49□□□□□ -0.25
ACTB-205ENST00000432588 CLEC12AQ5QGZ9 265 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 PRAMEF6Q5VXH4 476 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 LYPD2Q6UXB3 125 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 SPATC1Q76KD6 591 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 PROKR2Q8NFJ6 384 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 OR4C15Q8NGM1 316 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 OR2T4Q8NH00 348 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 MAP6Q96JE9 813 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 ADAT1Q9BUB4 502 aaKnown RBP13.49□□□□□ -0.25
ACTB-205ENST00000432588 IL1RAPQ9NPH3 570 aa13.49□□□□□ -0.25
ACTB-205ENST00000432588 MRPL22Q9NWU5 206 aaKnown RBP13.49□□□□□ -0.25
ACTB-205ENST00000432588 TRRAPQ9Y4A5 3859 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 GGT3PA6NGU5 568 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 ARPC2O15144 300 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 HOXA3O43365 443 aaPredicted RBP13.48□□□□□ -0.25
ACTB-205ENST00000432588 LIPFP07098 398 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 BRD3OSQ6XYD6 125 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 ZNF841Q6ZN19 808 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 C19orf18Q8NEA5 215 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 TMIGD2Q96BF3 282 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 SLITRK2Q9H156 845 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 OPA3Q9H6K4 179 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 ERVK-18Q9QC07 812 aa13.48□□□□□ -0.25
ACTB-205ENST00000432588 SOX21Q9Y651 276 aaPredicted RBP13.48□□□□□ -0.25
ACTB-205ENST00000432588 TRAV38-1A0A0B4J264 116 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.47□□□□□ -0.25
ACTB-205ENST00000432588 MDFIC2A0A1B0GVS7 189 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 LGALS8O00214 317 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 NDUFA2O43678 99 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 KRT36O76013 467 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 CRYBA1P05813 215 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 PYCR1P32322 319 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 ZNF92Q03936 586 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 MZT1Q08AG7 82 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 DEFB112Q30KQ8 113 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 SNAI3Q3KNW1 292 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 PGAM4Q8N0Y7 254 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 LINC00471Q8N535 108 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
ACTB-205ENST00000432588 SPERTQ8NA61 448 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 PCGF1Q9BSM1 259 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 COPS4Q9BT78 406 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 FAM107BQ9H098 131 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 PRDM13Q9H4Q3 707 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 NOX4Q9NPH5 578 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 MRPL15Q9P015 296 aaKnown RBP13.47□□□□□ -0.25
ACTB-205ENST00000432588 CDH10Q9Y6N8 788 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 DOCK11Q5JSL3 2073 aa13.47□□□□□ -0.25
ACTB-205ENST00000432588 A0A1B0GUS0 222 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 SRRM5B3KS81 715 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 C22orf46C9J442 243 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 C3orf80F5H4A9 247 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 P2RY10O00398 339 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 PTBP3O95758 552 aaKnown RBP13.46□□□□□ -0.25
ACTB-205ENST00000432588 OTX1P32242 354 aaPredicted RBP13.46□□□□□ -0.25
ACTB-205ENST00000432588 MSX2P35548 267 aaPredicted RBP13.46□□□□□ -0.25
ACTB-205ENST00000432588 RPS27P42677 84 aaKnown RBP13.46□□□□□ -0.25
ACTB-205ENST00000432588 TAF13Q15543 124 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 OR8B8Q15620 311 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 ZNF362Q5T0B9 420 aaPredicted RBP13.46□□□□□ -0.25
ACTB-205ENST00000432588 SFRP4Q6FHJ7 346 aaPredicted RBP13.46□□□□□ -0.25
ACTB-205ENST00000432588 TREML4Q6UXN2 200 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 PNLDC1Q8NA58 520 aaKnown RBP13.46□□□□□ -0.25
ACTB-205ENST00000432588 CYB561A3Q8NBI2 242 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 OR2AE1Q8NHA4 323 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 CDRT15Q96T59 188 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 EGLN3Q9H6Z9 239 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 NDE1Q9NXR1 346 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 CD300AQ9UGN4 299 aa13.46□□□□□ -0.25
ACTB-205ENST00000432588 OOEPA6NGQ2 149 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 A6NLC8 198 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 ZNF879B4DU55 563 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 BHLHE40O14503 412 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 ADAM20O43506 726 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 TOX4O94842 621 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 MDKP21741 143 aaPredicted RBP13.45□□□□□ -0.26
ACTB-205ENST00000432588 FMO3P31513 532 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 HMGA2P52926 109 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 SPATS1Q496A3 300 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 GLYATL3Q5SZD4 288 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 METTL11BQ5VVY1 283 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 DCXRQ7Z4W1 244 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 CPLX4Q7Z7G2 160 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 OR4F5Q8NH21 305 aa13.45□□□□□ -0.26
ACTB-205ENST00000432588 FAM71F1Q96KD3 344 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms