RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SYS1Q8N2H4 156 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 GPR148Q8TDV2 347 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PSMF1Q92530 271 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM18Q96B42 140 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PYCR2Q96C36 320 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CTHRC1Q96CG8 243 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PLPPR2Q96GM1 343 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 SEC22AQ96IW7 307 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 OR2A14Q96R47 310 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 TBX15Q96SF7 602 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 C19orf24Q9BVV8 132 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 SSBP4Q9BWG4 385 aaPredicted RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 LAT2Q9GZY6 243 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 RCC2Q9P258 522 aaKnown RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ETV7Q9Y603 341 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 HECW1Q76N89 1606 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CPSF1Q10570 1443 aaKnown RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ABCA6Q8N139 1617 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 A0A0U1RQV1 116 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 HHLA1C9JL84 531 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 E7EQ34 232 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 AIFM1O95831 613 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 AMBPP02760 352 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 MPC1LP0DKB6 136 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 TACR1P25103 407 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 IMPA1P29218 277 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ETV6P41212 452 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 PLCXD2Q0VAA5 305 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LGALSLQ3ZCW2 172 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 C6orf141Q5SZD1 244 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 MORN1Q5T089 497 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 GFI1BQ5VTD9 330 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 GKN2Q86XP6 184 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 C3orf56Q8N813 242 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 OR52R1Q8NGF1 315 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 OR5R1Q8NH85 324 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 GPR119Q8TDV5 335 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 FBLIM1Q8WUP2 373 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ZNRF4Q8WWF5 429 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 HOXB13Q92826 284 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 GPER1Q99527 375 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 PRODH2Q9UF12 536 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 SMPXQ9UHP9 88 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 PLXNC1O60486 1568 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 SYNMO15061 1565 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 TDGF1P13385 188 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 FAM3BP58499 235 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 RPS13P62277 151 aaKnown RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 SNRPD1P62314 119 aaKnown RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 EGR4Q05215 589 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 RPEL1Q2QD12 228 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 TTC32Q5I0X7 151 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LINC01551Q86U37 167 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 CD163Q86VB7 1156 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 CMTM4Q8IZR5 234 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 IQCF1Q8N6M8 205 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 SLC16A11Q8NCK7 471 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 M1APQ8TC57 530 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LGALS14Q8TCE9 139 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 TMBIM1Q969X1 311 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 OR7D2Q96RA2 312 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ATG10Q9H0Y0 220 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF780BQ9Y6R6 833 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LOC105371242A0A075B767 164 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LOC102723996A0A087X1L8 192 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 A0A0B4J2A0 478 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 A0A0U1RQS6 177 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 MBD3L4A6NDZ8 208 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 MBD3L3A6NE82 208 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 MBD3L5A6NJ08 208 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ATP5LO75964 103 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 GABARAPO95166 117 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 CELP19835 753 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 P2RY2P41231 377 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 CTSKP43235 329 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 KIR2DL3P43628 341 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 RAE1P78406 368 aaKnown RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ATXN7L3Q14CW9 347 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 SIX1Q15475 284 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM183BQ1AE95 376 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 GLYR1Q49A26 553 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 C22orf42Q6IC83 251 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LINC00299Q6ZSB3 139 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 TPRG1Q6ZUI0 275 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 Q71RC1 249 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 MEPCEQ7L2J0 689 aaKnown RBP4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LAS2Q8IYD9 372 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 SLC39A11Q8N1S5 342 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ARIH2OSQ8N7S6 290 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 NOXO1Q8NFA2 376 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 OR4K15Q8NH41 348 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 ACOX2Q99424 681 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 TLNRD1Q9H1K6 362 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 OR51J1Q9H342 316 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 A4GALTQ9NPC4 353 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 FKBP11Q9NYL4 201 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms